RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TELO2Q9Y4R8 837 aa14.93□□□□□ -0.02
CLK3-203ENST00000454830 PSAPP07602 524 aa14.93□□□□□ -0.02
CLK3-203ENST00000454830 PLS3P13797 630 aa14.93□□□□□ -0.02
CLK3-203ENST00000454830 PON1P27169 355 aa14.93□□□□□ -0.02
CLK3-203ENST00000454830 GPR162Q16538 588 aa14.93□□□□□ -0.02
CLK3-203ENST00000454830 BMT2Q1RMZ1 405 aa14.93□□□□□ -0.02
CLK3-203ENST00000454830 TMCO3Q6UWJ1 677 aa14.93□□□□□ -0.02
CLK3-203ENST00000454830 B3GNT9Q6UX72 402 aa14.93□□□□□ -0.02
CLK3-203ENST00000454830 GPRASP2Q96D09 838 aa14.93□□□□□ -0.02
CLK3-203ENST00000454830 C12orf42Q96LP6 360 aa14.93□□□□□ -0.02
CLK3-203ENST00000454830 SAR1BQ9Y6B6 198 aa14.93□□□□□ -0.02
CLK3-203ENST00000454830 NOP2P46087 812 aaKnown RBP14.92□□□□□ -0.02
CLK3-203ENST00000454830 SRGAP1Q7Z6B7 1085 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 GOLGA5Q8TBA6 731 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 CBWD1Q9BRT8 395 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 KMT5AQ9NQR1 393 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 SLC16A3O15427 465 aaKnown RBP14.92□□□□□ -0.02
CLK3-203ENST00000454830 GFPT2O94808 682 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 MATR3P43243 847 aaKnown RBP eCLIP14.92□□□□□ -0.02
CLK3-203ENST00000454830 OAZ1P54368 228 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 MAPK7Q13164 816 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 PTPROQ16827 1216 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 DNAAF5Q86Y56 855 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 CDHR1Q96JP9 859 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 MARSP56192 900 aaKnown RBP14.92□□□□□ -0.02
CLK3-203ENST00000454830 ACTR2P61160 394 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 MYL7Q01449 175 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 KIAA0753Q2KHM9 967 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 C4orf19Q8IY42 314 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 REPS2Q8NFH8 660 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 EDEM3Q9BZQ6 932 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 TMEM206Q9H813 350 aa14.92□□□□□ -0.02
CLK3-203ENST00000454830 TMCO5BA8MYB1 307 aa14.91□□□□□ -0.02
CLK3-203ENST00000454830 KLHDC7AQ5VTJ3 777 aa14.91□□□□□ -0.02
CLK3-203ENST00000454830 SAMD3Q8N6K7 520 aa14.91□□□□□ -0.02
CLK3-203ENST00000454830 SAAL1Q96ER3 474 aa14.91□□□□□ -0.02
CLK3-203ENST00000454830 DENND3A2RUS2 1198 aa14.91□□□□□ -0.02
CLK3-203ENST00000454830 LRRN2O75325 713 aa14.91□□□□□ -0.02
CLK3-203ENST00000454830 ZNF131P52739 623 aa14.91□□□□□ -0.02
CLK3-203ENST00000454830 CETN1Q12798 172 aa14.91□□□□□ -0.02
CLK3-203ENST00000454830 VPS36Q86VN1 386 aa14.91□□□□□ -0.02
CLK3-203ENST00000454830 TXLNBQ8N3L3 684 aa14.91□□□□□ -0.02
CLK3-203ENST00000454830 DBR1Q9UK59 544 aaKnown RBP14.91□□□□□ -0.02
CLK3-203ENST00000454830 TLR2O60603 784 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 CXCR5P32302 372 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 GCLMP48507 274 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 CDK17Q00537 523 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 PRKCEQ02156 737 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 FSTL1Q12841 308 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 CCDC181Q5TID7 509 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 ZNF746Q6NUN9 644 aaPredicted RBP14.9□□□□□ -0.02
CLK3-203ENST00000454830 ANO5Q75V66 913 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 INPP4AQ96PE3 977 aaPredicted RBP14.9□□□□□ -0.02
CLK3-203ENST00000454830 CCDC94Q9BW85 323 aaPredicted RBP14.9□□□□□ -0.02
CLK3-203ENST00000454830 BTBD7Q9P203 1132 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 ZMYM2Q9UBW7 1377 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 FMO5P49326 533 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 POLGP54098 1239 aaPredicted RBP14.9□□□□□ -0.02
CLK3-203ENST00000454830 MIS18BP1Q6P0N0 1132 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 CCDC60Q8IWA6 550 aaPredicted RBP14.9□□□□□ -0.02
CLK3-203ENST00000454830 CAPN6Q9Y6Q1 641 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 DKC1O60832 514 aaKnown RBP eCLIP14.9□□□□□ -0.02
CLK3-203ENST00000454830 PGK2P07205 417 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 YBX3P16989 372 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■■□□ 18.1
CLK3-203ENST00000454830 CLCN6P51797 869 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 XRRA1Q6P2D8 792 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 CDCA5Q96FF9 252 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 IFT74Q96LB3 600 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 FIZ1Q96SL8 496 aa14.9□□□□□ -0.02
CLK3-203ENST00000454830 A0A087X0T9 212 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 SEC31AO94979 1220 aaKnown RBP14.89□□□□□ -0.03
CLK3-203ENST00000454830 FAM228BP0C875 321 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 HNRNPH3P31942 346 aaKnown RBP14.89□□□□□ -0.03
CLK3-203ENST00000454830 ANKRD13AQ8IZ07 590 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 TRIM58Q8NG06 486 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 NOX5Q96PH1 765 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 GANQ9H2C0 597 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 HNRNPDLO14979 420 aaKnown RBP14.89□□□□□ -0.03
CLK3-203ENST00000454830 ZNF185O15231 689 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 XXYLT1Q8NBI6 393 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 POMGNT1Q8WZA1 660 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 HINFPQ9BQA5 517 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 HSPBP1Q9NZL4 362 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 DNAJC12Q9UKB3 198 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 EXOC7Q9UPT5 735 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 USP20Q9Y2K6 914 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 EMSYQ7Z589 1322 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 MAFGO15525 162 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 ZNF862O60290 1169 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 RGS20O76081 388 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 KCNA2P16389 499 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 EPHX2P34913 555 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 STAT1P42224 750 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 PTK2Q05397 1052 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 BFSP1Q12934 665 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 WHAMMP3Q1A5X7 153 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 CBWD6Q4V339 395 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 CBWD3Q5JTY5 395 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 CBWD5Q5RIA9 395 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 NOL9Q5SY16 702 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms