RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 YWHABP31946 246 aaKnown RBP16.31■□□□□ 0.2
HSPG2-207ENST00000453796 MCM7P33993 719 aa16.31■□□□□ 0.2
HSPG2-207ENST00000453796 CYP4A11Q02928 519 aa16.31■□□□□ 0.2
HSPG2-207ENST00000453796 EPC2Q52LR7 807 aa16.31■□□□□ 0.2
HSPG2-207ENST00000453796 TMEM192Q8IY95 271 aa16.31■□□□□ 0.2
HSPG2-207ENST00000453796 NEK9Q8TD19 979 aa16.31■□□□□ 0.2
HSPG2-207ENST00000453796 CLP1Q92989 425 aaKnown RBP16.31■□□□□ 0.2
HSPG2-207ENST00000453796 BACH2Q9BYV9 841 aa16.31■□□□□ 0.2
HSPG2-207ENST00000453796 ZSWIM4Q9H7M6 989 aa16.31■□□□□ 0.2
HSPG2-207ENST00000453796 C1orf112Q9NSG2 853 aa16.31■□□□□ 0.2
HSPG2-207ENST00000453796 XIRP2A4UGR9 3374 aa16.31■□□□□ 0.2
HSPG2-207ENST00000453796 POTEMA6NI47 508 aa16.3■□□□□ 0.2
HSPG2-207ENST00000453796 C5orf67F2Z3F1 127 aa16.3■□□□□ 0.2
HSPG2-207ENST00000453796 STAG3L1P0CL83 205 aa16.3■□□□□ 0.2
HSPG2-207ENST00000453796 ATP2B1P20020 1258 aa16.3■□□□□ 0.2
HSPG2-207ENST00000453796 TRAPPC10P48553 1259 aa16.3■□□□□ 0.2
HSPG2-207ENST00000453796 MCM2P49736 904 aa16.3■□□□□ 0.2
HSPG2-207ENST00000453796 FAM189BP81408 668 aa16.3■□□□□ 0.2
HSPG2-207ENST00000453796 CDC42EP1Q00587 391 aa16.3■□□□□ 0.2
HSPG2-207ENST00000453796 SLC24A5Q71RS6 500 aa16.3■□□□□ 0.2
HSPG2-207ENST00000453796 FIBCD1Q8N539 461 aa16.3■□□□□ 0.2
HSPG2-207ENST00000453796 CEP170P1Q96L14 293 aa16.3■□□□□ 0.2
HSPG2-207ENST00000453796 JPH2Q9BR39 696 aaPredicted RBP16.3■□□□□ 0.2
HSPG2-207ENST00000453796 PLXNA4Q9HCM2 1894 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 A0A087WZ62 844 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 DENND3A2RUS2 1198 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 H3BNC9 293 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 RFC5P40937 340 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 DNM2P50570 870 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 TOB1P50616 345 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-207ENST00000453796 ZNF174Q15697 407 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 TTC38Q5R3I4 469 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 OTUD6AQ7L8S5 288 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 ZNF410Q86VK4 478 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 TPH2Q8IWU9 490 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 CMTR2Q8IYT2 770 aaKnown RBP16.29■□□□□ 0.2
HSPG2-207ENST00000453796 MICALL1Q8N3F8 863 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 C4orf32Q8N8J7 132 aa16.29■□□□□ 0.2
HSPG2-207ENST00000453796 FDXACB1Q9BRP7 624 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-207ENST00000453796 SUCLA2Q9P2R7 463 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-207ENST00000453796 CSDE1O75534 798 aaKnown RBP16.28■□□□□ 0.2
HSPG2-207ENST00000453796 OR52Z1P0C646 297 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 SPATA31C1P0DKV0 1188 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 FGFR4P22455 802 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 GJB2P29033 226 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 BMPR1AP36894 532 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 GATMP50440 423 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 BTG3Q14201 252 aaPredicted RBP16.28■□□□□ 0.2
HSPG2-207ENST00000453796 NBR1Q14596 966 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 RHPN2Q8IUC4 686 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 KSR1Q8IVT5 923 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 EXOC8Q8IYI6 725 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 NLRP7Q8WX94 980 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 SLC7A3Q8WY07 619 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 GCOM2Q9BZD3 368 aaPredicted RBP16.28■□□□□ 0.2
HSPG2-207ENST00000453796 ELAC1Q9H777 363 aaKnown RBP16.28■□□□□ 0.2
HSPG2-207ENST00000453796 XPNPEP1Q9NQW7 623 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 KIF3AQ9Y496 699 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 MYO7AQ13402 2215 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 BRWD1Q9NSI6 2320 aa16.28■□□□□ 0.2
HSPG2-207ENST00000453796 GAS2O43903 313 aaKnown RBP16.27■□□□□ 0.2
HSPG2-207ENST00000453796 RB1P06400 928 aa16.27■□□□□ 0.2
HSPG2-207ENST00000453796 POLGP54098 1239 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-207ENST00000453796 GNL2Q13823 731 aaKnown RBP16.27■□□□□ 0.2
HSPG2-207ENST00000453796 EMC2Q15006 297 aa16.27■□□□□ 0.2
HSPG2-207ENST00000453796 XKR9Q5GH70 373 aa16.27■□□□□ 0.2
HSPG2-207ENST00000453796 IFT122Q9HBG6 1241 aa16.27■□□□□ 0.2
HSPG2-207ENST00000453796 ANKEF1Q9NU02 776 aa16.27■□□□□ 0.2
HSPG2-207ENST00000453796 RNF19AQ9NV58 838 aa16.27■□□□□ 0.2
HSPG2-207ENST00000453796 TMEM161AQ9NX61 479 aa16.27■□□□□ 0.2
HSPG2-207ENST00000453796 THEGQ9P2T0 379 aa16.27■□□□□ 0.2
HSPG2-207ENST00000453796 NOL7Q9UMY1 257 aaKnown RBP16.27■□□□□ 0.2
HSPG2-207ENST00000453796 RWDD3Q9Y3V2 267 aa16.27■□□□□ 0.2
HSPG2-207ENST00000453796 PCDHB7Q9Y5E2 793 aa16.27■□□□□ 0.2
HSPG2-207ENST00000453796 COL4A3BPQ9Y5P4 624 aa16.27■□□□□ 0.2
HSPG2-207ENST00000453796 MRPL42Q9Y6G3 142 aaKnown RBP16.27■□□□□ 0.2
HSPG2-207ENST00000453796 MED24O75448 989 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 CTNNB1P35222 781 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 TECP42680 631 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 RARRES1P49788 294 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 GPM6BQ13491 265 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 PAN2Q504Q3 1202 aaKnown RBP16.26■□□□□ 0.19
HSPG2-207ENST00000453796 FAM102BQ5T8I3 360 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 CATSPER3Q86XQ3 398 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 PRPF31Q8WWY3 499 aaKnown RBP16.26■□□□□ 0.19
HSPG2-207ENST00000453796 PSPC1Q8WXF1 523 aaKnown RBP16.26■□□□□ 0.19
HSPG2-207ENST00000453796 TMEM143Q96AN5 459 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 MRPL38Q96DV4 380 aaKnown RBP16.26■□□□□ 0.19
HSPG2-207ENST00000453796 SCLT1Q96NL6 688 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 POLR3CQ9BUI4 534 aaPredicted RBP16.26■□□□□ 0.19
HSPG2-207ENST00000453796 TUFT1Q9NNX1 390 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 BMP2KQ9NSY1 1161 aaPredicted RBP16.26■□□□□ 0.19
HSPG2-207ENST00000453796 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
HSPG2-207ENST00000453796 LRFN2Q9ULH4 789 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 PCDHB6Q9Y5E3 794 aa16.26■□□□□ 0.19
HSPG2-207ENST00000453796 XRCC6P12956 609 aaKnown RBP eCLIP16.25■□□□□ 0.19
HSPG2-207ENST00000453796 ZSCAN20P17040 1043 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-207ENST00000453796 ATF7P17544 494 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-207ENST00000453796 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■□□□□ 9.2
HSPG2-207ENST00000453796 CUL4AQ13619 759 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms