RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 PRDM6Q9NQX0 595 aa15.76■□□□□ 0.11
RTFDC1-204ENST00000449062 LMCD1Q9NZU5 365 aa15.76■□□□□ 0.11
RTFDC1-204ENST00000449062 SUCLA2Q9P2R7 463 aaPredicted RBP15.76■□□□□ 0.11
RTFDC1-204ENST00000449062 COL4A6Q14031 1691 aa15.76■□□□□ 0.11
RTFDC1-204ENST00000449062 LOXHD1Q8IVV2 1947 aa15.75■□□□□ 0.11
RTFDC1-204ENST00000449062 XRCC6P12956 609 aaKnown RBP eCLIP15.75■□□□□ 0.11
RTFDC1-204ENST00000449062 SARSP49591 514 aaKnown RBP15.75■□□□□ 0.11
RTFDC1-204ENST00000449062 CYP4A11Q02928 519 aa15.75■□□□□ 0.11
RTFDC1-204ENST00000449062 CCDC85BQ15834 202 aaPredicted RBP15.75■□□□□ 0.11
RTFDC1-204ENST00000449062 EPC2Q52LR7 807 aa15.75■□□□□ 0.11
RTFDC1-204ENST00000449062 ODR4Q5SWX8 454 aa15.75■□□□□ 0.11
RTFDC1-204ENST00000449062 SLC24A5Q71RS6 500 aa15.75■□□□□ 0.11
RTFDC1-204ENST00000449062 TMEM192Q8IY95 271 aa15.75■□□□□ 0.11
RTFDC1-204ENST00000449062 CEP170P1Q96L14 293 aa15.75■□□□□ 0.11
RTFDC1-204ENST00000449062 MTUS1Q9ULD2 1270 aa15.75■□□□□ 0.11
RTFDC1-204ENST00000449062 CSDE1O75534 798 aaKnown RBP15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 BMPR1AP36894 532 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 RFC5P40937 340 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 DNM2P50570 870 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 CUL4AQ13619 759 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 NBR1Q14596 966 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 TTC38Q5R3I4 469 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 OTUD6AQ7L8S5 288 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 CATSPER3Q86XQ3 398 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 KSR1Q8IVT5 923 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 FIBCD1Q8N539 461 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 PRPF31Q8WWY3 499 aaKnown RBP15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 SAMD11Q96NU1 681 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 JPH2Q9BR39 696 aaPredicted RBP15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 IFT122Q9HBG6 1241 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 XPNPEP1Q9NQW7 623 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 C1orf112Q9NSG2 853 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 ANKEF1Q9NU02 776 aa15.74■□□□□ 0.11
RTFDC1-204ENST00000449062 A0A087WWV3 80 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 A0A087WZ62 844 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 POTEMA6NI47 508 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 C5orf67F2Z3F1 127 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 H3BNC9 293 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 STAG3L1P0CL83 205 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 GJB2P29033 226 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 ZNF410Q86VK4 478 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 EXOC8Q8IYI6 725 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 FBXO22Q8NEZ5 403 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 NEK9Q8TD19 979 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 GDPD5Q8WTR4 605 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 PPM1EQ8WY54 764 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 FDXACB1Q9BRP7 624 aaPredicted RBP15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 POLR3CQ9BUI4 534 aaPredicted RBP15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 PCDHB6Q9Y5E3 794 aa15.73■□□□□ 0.11
RTFDC1-204ENST00000449062 ADGRA3Q8IWK6 1321 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 MED24O75448 989 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 RB1P06400 928 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 OR52Z1P0C646 297 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 FGFR4P22455 802 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 TECP42680 631 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 GATMP50440 423 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 IL17AQ16552 155 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 XKR9Q5GH70 373 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 FAM102BQ5T8I3 360 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 RHPN2Q8IUC4 686 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 CMTR2Q8IYT2 770 aaKnown RBP15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 SLC7A3Q8WY07 619 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 TMEM143Q96AN5 459 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 TRAIPQ9BWF2 469 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 GCOM2Q9BZD3 368 aaPredicted RBP15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 ELAC1Q9H777 363 aaKnown RBP15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 RNF19AQ9NV58 838 aa15.72■□□□□ 0.11
RTFDC1-204ENST00000449062 DENND3A2RUS2 1198 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 GTPBP6O43824 516 aaPredicted RBP15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 RARRES1P49788 294 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 LAMTOR4Q0VGL1 99 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 PTGDRQ13258 359 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 BTG3Q14201 252 aaPredicted RBP15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 PDIA5Q14554 519 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 ZNF598Q86UK7 904 aaKnown RBP15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 PIGOQ8TEQ8 1089 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 NLRP7Q8WX94 980 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 MINDY3Q9H8M7 445 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 TUFT1Q9NNX1 390 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 CHST12Q9NRB3 414 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 TMEM161AQ9NX61 479 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 KIF3AQ9Y496 699 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 PCDHB7Q9Y5E2 793 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 COL4A3BPQ9Y5P4 624 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 GTF3C3Q9Y5Q9 886 aa15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 MRPL42Q9Y6G3 142 aaKnown RBP15.71■□□□□ 0.11
RTFDC1-204ENST00000449062 A0A0U1RQF3 1178 aa15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 ASAP2O43150 1006 aa15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 GAS2O43903 313 aaKnown RBP15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 RPA1P27694 616 aa15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 HOXA11P31270 313 aaPredicted RBP15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 ARL2P36404 184 aa15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 POLGP54098 1239 aaPredicted RBP15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 GPM6BQ13491 265 aa15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 CAMK1Q14012 370 aa15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 EMC2Q15006 297 aa15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 ECM1Q16610 540 aa15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 FERMT3Q86UX7 667 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms