RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 POU3F3P20264 500 aaPredicted RBP17.12■□□□□ 0.33
SEC22C-208ENST00000445388 SARSP49591 514 aaKnown RBP17.12■□□□□ 0.33
SEC22C-208ENST00000445388 DSC3Q14574 896 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 EPC2Q52LR7 807 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 ODR4Q5SWX8 454 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 MCTP1Q6DN14 999 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 OTUD6AQ7L8S5 288 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 RHPN2Q8IUC4 686 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 NPAS4Q8IUM7 802 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 TMEM192Q8IY95 271 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 FIBCD1Q8N539 461 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 FBXO22Q8NEZ5 403 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 TMEM143Q96AN5 459 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 FDXACB1Q9BRP7 624 aaPredicted RBP17.12■□□□□ 0.33
SEC22C-208ENST00000445388 DHX33Q9H6R0 707 aaKnown RBP17.12■□□□□ 0.33
SEC22C-208ENST00000445388 NOL7Q9UMY1 257 aaKnown RBP17.12■□□□□ 0.33
SEC22C-208ENST00000445388 SMC3Q9UQE7 1217 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 PCDHB6Q9Y5E3 794 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 TTC3P53804 2025 aa17.12■□□□□ 0.33
SEC22C-208ENST00000445388 COL4A4P53420 1690 aaPredicted RBP17.11■□□□□ 0.33
SEC22C-208ENST00000445388 COL4A6Q14031 1691 aa17.11■□□□□ 0.33
SEC22C-208ENST00000445388 C9IYK1 514 aa17.11■□□□□ 0.33
SEC22C-208ENST00000445388 GTPBP6O43824 516 aaPredicted RBP17.11■□□□□ 0.33
SEC22C-208ENST00000445388 LINC00271P0C7V0 271 aa17.11■□□□□ 0.33
SEC22C-208ENST00000445388 SPATA31C1P0DKV0 1188 aa17.11■□□□□ 0.33
SEC22C-208ENST00000445388 TRAPPC10P48553 1259 aa17.11■□□□□ 0.33
SEC22C-208ENST00000445388 POLGP54098 1239 aaPredicted RBP17.11■□□□□ 0.33
SEC22C-208ENST00000445388 BTG3Q14201 252 aaPredicted RBP17.11■□□□□ 0.33
SEC22C-208ENST00000445388 PAN2Q504Q3 1202 aaKnown RBP17.11■□□□□ 0.33
SEC22C-208ENST00000445388 PIGOQ8TEQ8 1089 aa17.11■□□□□ 0.33
SEC22C-208ENST00000445388 SLC7A3Q8WY07 619 aa17.11■□□□□ 0.33
SEC22C-208ENST00000445388 LRFN2Q9ULH4 789 aa17.11■□□□□ 0.33
SEC22C-208ENST00000445388 KIF3AQ9Y496 699 aa17.11■□□□□ 0.33
SEC22C-208ENST00000445388 PCDHB7Q9Y5E2 793 aa17.11■□□□□ 0.33
SEC22C-208ENST00000445388 ADGRA3Q8IWK6 1321 aa17.11■□□□□ 0.33
SEC22C-208ENST00000445388 MED24O75448 989 aa17.1■□□□□ 0.33
SEC22C-208ENST00000445388 LYPLA2O95372 231 aa17.1■□□□□ 0.33
SEC22C-208ENST00000445388 STAG3L1P0CL83 205 aa17.1■□□□□ 0.33
SEC22C-208ENST00000445388 RFC5P40937 340 aa17.1■□□□□ 0.33
SEC22C-208ENST00000445388 FAM189BP81408 668 aa17.1■□□□□ 0.33
SEC22C-208ENST00000445388 ORC2Q13416 577 aaPredicted RBP17.1■□□□□ 0.33
SEC22C-208ENST00000445388 SLC24A5Q71RS6 500 aa17.1■□□□□ 0.33
SEC22C-208ENST00000445388 CATSPER3Q86XQ3 398 aa17.1■□□□□ 0.33
SEC22C-208ENST00000445388 ZNF710Q8N1W2 664 aa17.1■□□□□ 0.33
SEC22C-208ENST00000445388 NEK9Q8TD19 979 aa17.1■□□□□ 0.33
SEC22C-208ENST00000445388 PRPF31Q8WWY3 499 aaKnown RBP17.1■□□□□ 0.33
SEC22C-208ENST00000445388 NLRP4Q96MN2 994 aa17.1■□□□□ 0.33
SEC22C-208ENST00000445388 JPH2Q9BR39 696 aaPredicted RBP17.1■□□□□ 0.33
SEC22C-208ENST00000445388 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
SEC22C-208ENST00000445388 C1orf112Q9NSG2 853 aa17.1■□□□□ 0.33
SEC22C-208ENST00000445388 H3BQV1 296 aa17.09■□□□□ 0.33
SEC22C-208ENST00000445388 CDC42EP1Q00587 391 aa17.09■□□□□ 0.33
SEC22C-208ENST00000445388 PTGDRQ13258 359 aa17.09■□□□□ 0.33
SEC22C-208ENST00000445388 EMC2Q15006 297 aa17.09■□□□□ 0.33
SEC22C-208ENST00000445388 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
SEC22C-208ENST00000445388 SAMD11Q96NU1 681 aa17.09■□□□□ 0.33
SEC22C-208ENST00000445388 IFT122Q9HBG6 1241 aa17.09■□□□□ 0.33
SEC22C-208ENST00000445388 XPNPEP1Q9NQW7 623 aa17.09■□□□□ 0.33
SEC22C-208ENST00000445388 ANKEF1Q9NU02 776 aa17.09■□□□□ 0.33
SEC22C-208ENST00000445388 PPME1Q9Y570 386 aa17.09■□□□□ 0.33
SEC22C-208ENST00000445388 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.09■□□□□ 0.33
SEC22C-208ENST00000445388 COL4A3BPQ9Y5P4 624 aa17.09■□□□□ 0.33
SEC22C-208ENST00000445388 MRPL42Q9Y6G3 142 aaKnown RBP17.09■□□□□ 0.33
SEC22C-208ENST00000445388 H3BNC9 293 aa17.08■□□□□ 0.32
SEC22C-208ENST00000445388 SRGAP2CP0DJJ0 459 aa17.08■□□□□ 0.32
SEC22C-208ENST00000445388 FGFR1P11362 822 aa17.08■□□□□ 0.32
SEC22C-208ENST00000445388 ZSCAN20P17040 1043 aaPredicted RBP17.08■□□□□ 0.32
SEC22C-208ENST00000445388 CTNNB1P35222 781 aa17.08■□□□□ 0.32
SEC22C-208ENST00000445388 BMPR1AP36894 532 aa17.08■□□□□ 0.32
SEC22C-208ENST00000445388 LAMTOR4Q0VGL1 99 aa17.08■□□□□ 0.32
SEC22C-208ENST00000445388 GPM6BQ13491 265 aa17.08■□□□□ 0.32
SEC22C-208ENST00000445388 CUL4AQ13619 759 aa17.08■□□□□ 0.32
SEC22C-208ENST00000445388 LARP1BQ659C4 914 aaKnown RBP17.08■□□□□ 0.32
SEC22C-208ENST00000445388 ZNF410Q86VK4 478 aa17.08■□□□□ 0.32
SEC22C-208ENST00000445388 CMTR2Q8IYT2 770 aaKnown RBP17.08■□□□□ 0.32
SEC22C-208ENST00000445388 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.32
SEC22C-208ENST00000445388 PRUNE2Q8WUY3 3088 aa17.08■□□□□ 0.32
SEC22C-208ENST00000445388 RARRES1P49788 294 aa17.07■□□□□ 0.32
SEC22C-208ENST00000445388 IL17AQ16552 155 aa17.07■□□□□ 0.32
SEC22C-208ENST00000445388 ECM1Q16610 540 aa17.07■□□□□ 0.32
SEC22C-208ENST00000445388 FAM43BQ6ZT52 329 aaPredicted RBP17.07■□□□□ 0.32
SEC22C-208ENST00000445388 EXOC8Q8IYI6 725 aa17.07■□□□□ 0.32
SEC22C-208ENST00000445388 PSPC1Q8WXF1 523 aaKnown RBP17.07■□□□□ 0.32
SEC22C-208ENST00000445388 CLP1Q92989 425 aaKnown RBP17.07■□□□□ 0.32
SEC22C-208ENST00000445388 MTRQ99707 1265 aa17.07■□□□□ 0.32
SEC22C-208ENST00000445388 POLR3CQ9BUI4 534 aaPredicted RBP17.07■□□□□ 0.32
SEC22C-208ENST00000445388 MINDY3Q9H8M7 445 aa17.07■□□□□ 0.32
SEC22C-208ENST00000445388 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.07■□□□□ 0.32
SEC22C-208ENST00000445388 LMCD1Q9NZU5 365 aa17.07■□□□□ 0.32
SEC22C-208ENST00000445388 ARID2Q68CP9 1835 aa17.07■□□□□ 0.32
SEC22C-208ENST00000445388 NLRC5Q86WI3 1866 aa17.06■□□□□ 0.32
SEC22C-208ENST00000445388 TBKBP1A7MCY6 615 aa17.06■□□□□ 0.32
SEC22C-208ENST00000445388 XRCC6P12956 609 aaKnown RBP eCLIP17.06■□□□□ 0.32
SEC22C-208ENST00000445388 FXR2P51116 673 aaKnown RBP eCLIP17.06■□□□□ 0.32
SEC22C-208ENST00000445388 SKIV2LQ15477 1246 aaKnown RBP17.06■□□□□ 0.32
SEC22C-208ENST00000445388 POTEGQ6S5H5 508 aa17.06■□□□□ 0.32
SEC22C-208ENST00000445388 FERMT3Q86UX7 667 aa17.06■□□□□ 0.32
SEC22C-208ENST00000445388 ECHDC2Q86YB7 292 aa17.06■□□□□ 0.32
SEC22C-208ENST00000445388 TCP11Q8WWU5 503 aa17.06■□□□□ 0.32
SEC22C-208ENST00000445388 INO80BQ9C086 356 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms