RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 JAK3P52333 1124 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 GUCY1A3Q02108 690 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 E2F4Q16254 413 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 SMIM5Q71RC9 77 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 SH2D3CQ8N5H7 860 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 CCDC110Q8TBZ0 833 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 EPN3Q9H201 632 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 SMARCAL1Q9NZC9 954 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 ACSL3O95573 720 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 EPHA7Q15375 998 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 CCDC38Q502W7 563 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 WNT8AQ9H1J5 351 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 TDRD3Q9H7E2 651 aaKnown RBP17.9■□□□□ 0.46
TCOF1-206ENST00000445265 TBC1D22BQ9NU19 505 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 DUSP10Q9Y6W6 482 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 BCL9O00512 1426 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 ATRNO75882 1429 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 LRRIQ3A6PVS8 624 aaPredicted RBP17.9■□□□□ 0.46
TCOF1-206ENST00000445265 H3BQF6 201 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 ACTN1P12814 892 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 EIF2AK2P19525 551 aaKnown RBP17.9■□□□□ 0.46
TCOF1-206ENST00000445265 TMOD1P28289 359 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 CARSP49589 748 aaKnown RBP17.9■□□□□ 0.46
TCOF1-206ENST00000445265 GALCP54803 685 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 PRR5LQ6MZQ0 368 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 USP38Q8NB14 1042 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 BANK1Q8NDB2 785 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 ZNF446Q9NWS9 450 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 ANAPC7Q9UJX3 599 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 CAPN6Q9Y6Q1 641 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 CHUKO15111 745 aa17.89■□□□□ 0.46
TCOF1-206ENST00000445265 RPA1P27694 616 aa17.89■□□□□ 0.46
TCOF1-206ENST00000445265 CAV1Q03135 178 aa17.89■□□□□ 0.46
TCOF1-206ENST00000445265 CLEC10AQ8IUN9 316 aa17.89■□□□□ 0.46
TCOF1-206ENST00000445265 TBC1D31Q96DN5 1066 aa17.89■□□□□ 0.46
TCOF1-206ENST00000445265 SGK1O00141 431 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 IPO5O00410 1097 aaKnown RBP17.89■□□□□ 0.45
TCOF1-206ENST00000445265 EVI5O60447 810 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 ZIM3Q96PE6 472 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 ELAC2Q9BQ52 826 aaKnown RBP17.89■□□□□ 0.45
TCOF1-206ENST00000445265 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.89■□□□□ 0.45
TCOF1-206ENST00000445265 SCINQ9Y6U3 715 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 SLC9A1P19634 815 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 TMED2Q15363 201 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 ZNF564Q8TBZ8 553 aaPredicted RBP17.89■□□□□ 0.45
TCOF1-206ENST00000445265 ATP2A3Q93084 1043 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 SEMA6BQ9H3T3 888 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 RGL1Q9NZL6 768 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 MEFVO15553 781 aaPredicted RBP17.89■□□□□ 0.45
TCOF1-206ENST00000445265 SLC37A4O43826 429 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 KRT1P04264 644 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 MMP10P09238 476 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 NMT1P30419 496 aaKnown RBP17.89■□□□□ 0.45
TCOF1-206ENST00000445265 FAM133BQ5BKY9 247 aaKnown RBP17.89■□□□□ 0.45
TCOF1-206ENST00000445265 DNAJC24Q6P3W2 148 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 RNF207Q6ZRF8 634 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 BARGINQ6ZT62 677 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 HAUS1Q96CS2 278 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 LXNQ9BS40 222 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 ODF2LQ9ULJ1 636 aa17.89■□□□□ 0.45
TCOF1-206ENST00000445265 EXOC1LA0A1B0GW35 172 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 TRIM66O15016 1216 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 CCND2P30279 289 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 RNASELQ05823 741 aaKnown RBP17.88■□□□□ 0.45
TCOF1-206ENST00000445265 TRIP13Q15645 432 aaPredicted RBP17.88■□□□□ 0.45
TCOF1-206ENST00000445265 CEP55Q53EZ4 464 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 NUGGCQ68CJ6 796 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 JPH2Q9BR39 696 aaPredicted RBP17.88■□□□□ 0.45
TCOF1-206ENST00000445265 NFAT5O94916 1531 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 FAM208AQ9UK61 1670 aaKnown RBP17.88■□□□□ 0.45
TCOF1-206ENST00000445265 PMS1P54277 932 aaKnown RBP17.88■□□□□ 0.45
TCOF1-206ENST00000445265 MIS18BP1Q6P0N0 1132 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 SEPT12Q8IYM1 358 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 TBK1Q9UHD2 729 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 FEM1BQ9UK73 627 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 RAD51CO43502 376 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 QARSP47897 775 aaKnown RBP17.88■□□□□ 0.45
TCOF1-206ENST00000445265 MTMR1Q13613 665 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 KRT81Q14533 505 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 NBPF9Q3BBW0 867 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 FAM160B1Q5W0V3 765 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 AGPAT1Q99943 283 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 VCXQ9H320 206 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 PRDM4Q9UKN5 801 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 KRT14P02533 472 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 PSAPP07602 524 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 SARNPP82979 210 aaKnown RBP17.88■□□□□ 0.45
TCOF1-206ENST00000445265 CHMP6Q96FZ7 201 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 EMSYQ7Z589 1322 aa17.88■□□□□ 0.45
TCOF1-206ENST00000445265 WDR64B1ANS9 1081 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 SASH3O75995 380 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 GUCY2CP25092 1073 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 HSPA1LP34931 641 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 FMO5P49326 533 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 E2F5Q15329 346 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 KLHDC7AQ5VTJ3 777 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 HHIPL2Q6UWX4 724 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 MCPH1Q8NEM0 835 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 MICAL1Q8TDZ2 1067 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 MKNK1Q9BUB5 465 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms