RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 EIF4BP23588 611 aaKnown RBP12.05□□□□□ -0.48
HDAC6-211ENST00000443563 CD52P31358 61 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 ANP32AP39687 249 aaKnown RBP12.05□□□□□ -0.48
HDAC6-211ENST00000443563 WDR5P61964 334 aaKnown RBP12.05□□□□□ -0.48
HDAC6-211ENST00000443563 TFDP1Q14186 410 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 FOXD4L5Q5VV16 416 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-211ENST00000443563 GPR153Q6NV75 609 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 KRI1Q8N9T8 703 aaKnown RBP12.05□□□□□ -0.48
HDAC6-211ENST00000443563 RASSF8Q8NHQ8 419 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 FOXD4L4Q8WXT5 416 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-211ENST00000443563 OSMRQ99650 979 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 MMTAG2Q9BU76 263 aaKnown RBP12.05□□□□□ -0.48
HDAC6-211ENST00000443563 ADAMTS10Q9H324 1103 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 CXXC1Q9P0U4 656 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-211ENST00000443563 PADI3Q9ULW8 664 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 TRIOBPQ9H2D6 2365 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 CHD9Q3L8U1 2897 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 GBF1Q92538 1859 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 SPTLC2O15270 562 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 USO1O60763 962 aaKnown RBP12.04□□□□□ -0.48
HDAC6-211ENST00000443563 PPP6R2O75170 966 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 DARSP14868 501 aaKnown RBP12.04□□□□□ -0.48
HDAC6-211ENST00000443563 MARCKSP29966 332 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-211ENST00000443563 CDC25AP30304 524 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 NUCB2P80303 420 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 POU5F1BQ06416 359 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 NFX1Q12986 1120 aaKnown RBP12.04□□□□□ -0.48
HDAC6-211ENST00000443563 MKRN4PQ13434 485 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-211ENST00000443563 DRP2Q13474 957 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 ZRSR1Q15695 479 aaKnown RBP12.04□□□□□ -0.48
HDAC6-211ENST00000443563 RAB30Q15771 203 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 ECM1Q16610 540 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 PADI6Q6TGC4 694 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 LINC00301Q8NCQ3 95 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 KCNG4Q8TDN1 519 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 PRPF31Q8WWY3 499 aaKnown RBP12.04□□□□□ -0.48
HDAC6-211ENST00000443563 TMEM143Q96AN5 459 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 PPP1R16BQ96T49 567 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 TIPINQ9BVW5 301 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 CCSER1Q9C0I3 900 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 BHMT2Q9H2M3 363 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 AGO3Q9H9G7 860 aaKnown RBP12.04□□□□□ -0.48
HDAC6-211ENST00000443563 CDHR5Q9HBB8 845 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 TFIP11Q9UBB9 837 aaKnown RBP12.04□□□□□ -0.48
HDAC6-211ENST00000443563 CCDC39Q9UFE4 941 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 MSRAQ9UJ68 235 aa12.04□□□□□ -0.48
HDAC6-211ENST00000443563 FBXO2Q9UK22 296 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-211ENST00000443563 NOC2LQ9Y3T9 749 aaKnown RBP12.04□□□□□ -0.48
HDAC6-211ENST00000443563 PTPRSQ13332 1948 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 TMEM265A0A087WTH1 108 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 A0A087WZ62 844 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 E9PMD0 336 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 CYP11B2P19099 503 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 SFPQP23246 707 aaKnown RBP eCLIP12.03□□□□□ -0.48
HDAC6-211ENST00000443563 ARL2P36404 184 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 PHKA2P46019 1235 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 FXR1P51114 621 aaKnown RBP eCLIP12.03□□□□□ -0.48
HDAC6-211ENST00000443563 LAMTOR4Q0VGL1 99 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 PKP1Q13835 747 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 PCBP1Q15365 356 aaKnown RBP eCLIP12.03□□□□□ -0.48
HDAC6-211ENST00000443563 SRGAP1Q7Z6B7 1085 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 KIFAP3Q92845 792 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 NLRP4Q96MN2 994 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 FDXACB1Q9BRP7 624 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-211ENST00000443563 ZBED2Q9BTP6 218 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 OSBPL7Q9BZF2 842 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 CSRNP2Q9H175 543 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 ERVK-5Q9HDB9 667 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 XPNPEP1Q9NQW7 623 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 BMP2KQ9NSY1 1161 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-211ENST00000443563 KCND2Q9NZV8 630 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 ST3GAL5Q9UNP4 418 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 PCDHA11Q9Y5I1 949 aa12.03□□□□□ -0.48
HDAC6-211ENST00000443563 A0A087WWV3 80 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 DENND3A2RUS2 1198 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 ENPP3O14638 875 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 CUTAO60888 179 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 SRGAP2CP0DJJ0 459 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 ZSCAN20P17040 1043 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-211ENST00000443563 KRT85P78386 507 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 NCBP1Q09161 790 aaKnown RBP12.02□□□□□ -0.49
HDAC6-211ENST00000443563 GRB10Q13322 594 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 PPP2R5AQ15172 486 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 TCTN1Q2MV58 587 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 FOXD4L6Q3SYB3 417 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-211ENST00000443563 TMEM119Q4V9L6 283 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 FAM102BQ5T8I3 360 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 FOXD4L3Q6VB84 417 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-211ENST00000443563 FAM228AQ86W67 206 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 HERC6Q8IVU3 1022 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 MYOCDQ8IZQ8 938 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 SYT2Q8N9I0 419 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-211ENST00000443563 RNF149Q8NC42 400 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 TMEM40Q8WWA1 233 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 IFT74Q96LB3 600 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 PNMA5Q96PV4 448 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 NFKBIZQ9BYH8 718 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 C1orf112Q9NSG2 853 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 KCNG1Q9UIX4 513 aa12.02□□□□□ -0.49
HDAC6-211ENST00000443563 TRANK1O15050 2925 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms