RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 TPBGLP0DKB5 382 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 CCR3P51677 355 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 ATN1P54259 1190 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-202ENST00000432954 MLLT6P55198 1093 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-202ENST00000432954 OCRLQ01968 901 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 KRT71Q3SY84 523 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 TNNI3KQ59H18 835 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 ARMC4Q5T2S8 1044 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 METTL3Q86U44 580 aaKnown RBP11.72□□□□□ -0.53
CCDC171-202ENST00000432954 MDM1Q8TC05 714 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 CAVIN3Q969G5 261 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 NAPGQ99747 312 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-202ENST00000432954 BCL2L13Q9BXK5 485 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 FOXP3Q9BZS1 431 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 TRAV6A0A075B6T7 132 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 GOLGA8JA6NMD2 632 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 SYCE1LA8MT33 242 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 KLHL41O60662 606 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 CNOT3O75175 753 aaKnown RBP11.72□□□□□ -0.53
CCDC171-202ENST00000432954 YEATS4O95619 227 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 SFTPCP11686 197 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 IDEP14735 1019 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 FYB2Q5VWT5 728 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 EMBQ6PCB8 327 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 DPH6Q7L8W6 267 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 TMTC1Q8IUR5 882 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 FMR1NBQ8N0W7 255 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-202ENST00000432954 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC171-202ENST00000432954 CAGE1Q8TC20 777 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 CALML6Q8TD86 181 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 GGNBP2Q9H3C7 697 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 PPANQ9NQ55 473 aaKnown RBP11.72□□□□□ -0.53
CCDC171-202ENST00000432954 ZNF277Q9NRM2 450 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-202ENST00000432954 CYP39A1Q9NYL5 469 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 IVNS1ABPQ9Y6Y0 642 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 ARHGEF11O15085 1522 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 CENPBD1B2RD01 187 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 EXTL3O43909 919 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 POLR2CP19387 275 aaPredicted RBP11.71□□□□□ -0.53
CCDC171-202ENST00000432954 HOXD13P35453 343 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 AMPD2Q01433 879 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 RELQ04864 619 aaPredicted RBP11.71□□□□□ -0.53
CCDC171-202ENST00000432954 DHX9Q08211 1270 aaKnown RBP11.71□□□□□ -0.53
CCDC171-202ENST00000432954 RALGDSQ12967 914 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 RCN2Q14257 317 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 CFAP70Q5T0N1 1121 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 PDXDC2PQ6P474 469 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 C4orf22Q6V702 233 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 TPTE2Q6XPS3 522 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 ANO5Q75V66 913 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 SPATA2LQ8IUW3 424 aaPredicted RBP11.71□□□□□ -0.53
CCDC171-202ENST00000432954 SH2D3CQ8N5H7 860 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 CPSF7Q8N684 471 aaKnown RBP11.71□□□□□ -0.53
CCDC171-202ENST00000432954 LILRB4Q8NHJ6 448 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 EME1Q96AY2 570 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 COX4I2Q96KJ9 171 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 ATP6V1G3Q96LB4 118 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 NLRP3Q96P20 1036 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 NEURL2Q9BR09 285 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 API5Q9BZZ5 524 aaKnown RBP11.71□□□□□ -0.53
CCDC171-202ENST00000432954 NEK6Q9HC98 313 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 PCDHGA11Q9Y5H2 935 aa11.71□□□□□ -0.53
CCDC171-202ENST00000432954 CLRN2A0PK11 232 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 FUOMA2VDF0 154 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 FADS2P1A8MWK0 482 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 PFDN6O15212 129 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 ADCY3O60266 1144 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 NR1I2O75469 434 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 BAIAP3O94812 1187 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 KRT6AP02538 564 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 KRT6BP04259 564 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 DRD4P21917 467 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 PRKAR1BP31321 381 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 RPL9P32969 192 aaKnown RBP11.71□□□□□ -0.54
CCDC171-202ENST00000432954 UBA7P41226 1012 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 KRT6CP48668 564 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 MARSP56192 900 aaKnown RBP11.71□□□□□ -0.54
CCDC171-202ENST00000432954 RTP1P59025 263 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 PHKG1Q16816 387 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 SGO2Q562F6 1265 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 KIAA1614Q5VZ46 1190 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 B3GNT6Q6ZMB0 384 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 TOGARAM2Q6ZUX3 1019 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 TCP11L2Q8N4U5 519 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 ALG1Q9BT22 464 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 RAB17Q9H0T7 212 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 PLEKHA5Q9HAU0 1116 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 METTL5Q9NRN9 209 aaKnown RBP11.71□□□□□ -0.54
CCDC171-202ENST00000432954 STK32BQ9NY57 414 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 SELENONQ9NZV5 590 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 ZMYND8Q9ULU4 1186 aaPredicted RBP11.71□□□□□ -0.54
CCDC171-202ENST00000432954 MYH7P12883 1935 aa11.71□□□□□ -0.54
CCDC171-202ENST00000432954 ABCC3O15438 1527 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 MYH13Q9UKX3 1938 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 MACROD2A1Z1Q3 448 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 SULT1B1O43704 296 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 KLHL2O95198 593 aa11.7□□□□□ -0.54
CCDC171-202ENST00000432954 CALM1P0DP23 149 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms