RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 SH3GLB2Q9NR46 395 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 SPATA6Q9NWH7 488 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 PCDHA4Q9UN74 947 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 TREHO43280 583 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 FOXD2O60548 495 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 ALDH1A2O94788 518 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 FGF19O95750 216 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 CCDC192P0DO97 292 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 GLUD2P49448 558 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 USP11P51784 963 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 NRLP54845 237 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 PRPF4BQ13523 1007 aaKnown RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 USP41Q3LFD5 358 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 PDZD4Q76G19 769 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 PLPPR4Q7Z2D5 763 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 FAM177A1Q8N128 213 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 RNF149Q8NC42 400 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 PABPC5Q96DU9 382 aaKnown RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 RIT2Q99578 217 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 SFXN1Q9H9B4 322 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 KCNH7Q9NS40 1196 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 EVA1BQ9NVM1 165 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 PRMT7Q9NVM4 692 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 TMEM161AQ9NX61 479 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 GTF3C3Q9Y5Q9 886 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 STX6O43752 255 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 GBP1P32455 592 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 MCM7P33993 719 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 DCAF4L1Q3SXM0 396 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 VPS52Q8N1B4 723 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 TRPV1Q8NER1 839 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 RIN2Q8WYP3 895 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 NELL2Q99435 816 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 CYP26B1Q9NR63 512 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 POLR2AP24928 1970 aaKnown RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 SGSM2O43147 1006 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 ERVK-21P61565 698 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 PPP2R3AQ06190 1150 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 PLCB4Q15147 1175 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 SHROOM1Q2M3G4 852 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 LONRF3Q496Y0 759 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 FSIP1Q8NA03 581 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 SKA1Q96BD8 255 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 DDX27Q96GQ7 796 aaKnown RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 MED10Q9BTT4 135 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 LRWD1Q9UFC0 647 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 SLC8A2Q9UPR5 921 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 SSC5DA1L4H1 1573 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 K7ERI5 159 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 PES1O00541 588 aaKnown RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 KRT19P08727 400 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 GUCY1A2P33402 732 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 KRT40Q6A162 431 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 ZNF280DQ6N043 979 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 NIPA1Q7RTP0 329 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 CEP57L1Q8IYX8 460 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 SNX29Q8TEQ0 813 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 GANCQ8TET4 914 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 PGBD1Q96JS3 809 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 RPF1Q9H9Y2 349 aaKnown RBP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 KMT5AQ9NQR1 393 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 PADI3Q9ULW8 664 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 ST3GAL5Q9UNP4 418 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 COL4A3BPQ9Y5P4 624 aa5.07□□□□□ -1.6
UBE4A-202ENST00000431736 SF3B1O75533 1304 aaKnown RBP eCLIP5.07□□□□□ -1.6
UBE4A-202ENST00000431736 MYADML2A6NDP7 307 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 SH2B2O14492 632 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 NEBLO76041 1014 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 EOMESO95936 686 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 KRT13P13646 458 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 CTGFP29279 349 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 IFNAR2P48551 515 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 SYCP1Q15431 976 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ELF2Q15723 593 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 BMP2KLQ5H9B9 411 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 SPECC1Q5M775 1068 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 C20orf194Q5TEA3 1177 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 DCP1BQ8IZD4 617 aaKnown RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 KCNH6Q9H252 994 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 PRM3Q9NNZ6 103 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 VPS54Q9P1Q0 977 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ANKFY1Q9P2R3 1169 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 CEP83Q9Y592 693 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 PDIA4P13667 645 aaKnown RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 PBX2P40425 430 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 MYL7Q01449 175 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 SLFNL1Q499Z3 407 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ERICH6BQ5W0A0 696 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 ANKRD20A12PQ8NF67 263 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 OTUD7AQ8TE49 926 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 MRPS31Q92665 395 aaKnown RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 KIF2CQ99661 725 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 PHF7Q9BWX1 381 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 PCDHB15Q9Y5E8 787 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 BRCA1P38398 1863 aaKnown RBP5.06□□□□□ -1.6
UBE4A-202ENST00000431736 FGF18O76093 207 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 F2P00734 622 aa5.06□□□□□ -1.6
UBE4A-202ENST00000431736 VTNP04004 478 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms