RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 INO80BQ9C086 356 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-207ENST00000430858 DHX33Q9H6R0 707 aaKnown RBP10.97□□□□□ -0.65
HDAC6-207ENST00000430858 RC3H2Q9HBD1 1191 aaKnown RBP10.97□□□□□ -0.65
HDAC6-207ENST00000430858 ANKEF1Q9NU02 776 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 LRFN2Q9ULH4 789 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 RWDD3Q9Y3V2 267 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 ADGRA3Q8IWK6 1321 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 COL4A6Q14031 1691 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 PTPRSQ13332 1948 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 C9IYK1 514 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 MGEA5O60502 916 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 XRCC6P12956 609 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDAC6-207ENST00000430858 ZSCAN20P17040 1043 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-207ENST00000430858 TECP42680 631 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 TOB1P50616 345 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-207ENST00000430858 GRB10Q13322 594 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 CUL4AQ13619 759 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 BTG3Q14201 252 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-207ENST00000430858 DSC3Q14574 896 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 EPC2Q52LR7 807 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 RILPL1Q5EBL4 403 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 MCTP1Q6DN14 999 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 RHPN2Q8IUC4 686 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDAC6-207ENST00000430858 CMTR2Q8IYT2 770 aaKnown RBP10.96□□□□□ -0.65
HDAC6-207ENST00000430858 C4orf32Q8N8J7 132 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
HDAC6-207ENST00000430858 FBXO22Q8NEZ5 403 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 ERMNQ8TAM6 284 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 TCP11Q8WWU5 503 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 PSPC1Q8WXF1 523 aaKnown RBP10.96□□□□□ -0.65
HDAC6-207ENST00000430858 ZNF668Q96K58 619 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-207ENST00000430858 MTRQ99707 1265 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 C17orf80Q9BSJ5 609 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 TUFT1Q9NNX1 390 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 LMCD1Q9NZU5 365 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 MTUS1Q9ULD2 1270 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 PCDHB7Q9Y5E2 793 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 MTCH2Q9Y6C9 303 aa10.96□□□□□ -0.65
HDAC6-207ENST00000430858 COL6A3P12111 3177 aa10.96□□□□□ -0.66
HDAC6-207ENST00000430858 A0A087WZ62 844 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 LAD1O00515 517 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 ZBTB39O15060 712 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 ASAP2O43150 1006 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 LPXNO60711 386 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 DGAT1O75907 488 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 SPATA31C1P0DKV0 1188 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 SFPQP23246 707 aaKnown RBP eCLIP10.95□□□□□ -0.66
HDAC6-207ENST00000430858 RPA1P27694 616 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 RARRES1P49788 294 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 FXR2P51116 673 aaKnown RBP eCLIP10.95□□□□□ -0.66
HDAC6-207ENST00000430858 FAM189BP81408 668 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 NBR1Q14596 966 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 EMC2Q15006 297 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 LARP1BQ659C4 914 aaKnown RBP10.95□□□□□ -0.66
HDAC6-207ENST00000430858 HAUS3Q68CZ6 603 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 CATSPER3Q86XQ3 398 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 TMEM192Q8IY95 271 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 GDPD5Q8WTR4 605 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 PPM1EQ8WY54 764 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 CLP1Q92989 425 aaKnown RBP10.95□□□□□ -0.66
HDAC6-207ENST00000430858 NLRP4Q96MN2 994 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 CCDC43Q96MW1 224 aaKnown RBP10.95□□□□□ -0.66
HDAC6-207ENST00000430858 FDXACB1Q9BRP7 624 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-207ENST00000430858 POLR3CQ9BUI4 534 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-207ENST00000430858 RAB34Q9BZG1 259 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 ELAC1Q9H777 363 aaKnown RBP10.95□□□□□ -0.66
HDAC6-207ENST00000430858 CHST12Q9NRB3 414 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 TMEM161AQ9NX61 479 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 PCDHB6Q9Y5E3 794 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 COL4A3BPQ9Y5P4 624 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 STK24Q9Y6E0 443 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 EVPLQ92817 2033 aa10.95□□□□□ -0.66
HDAC6-207ENST00000430858 TTC3P53804 2025 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 WDR81Q562E7 1941 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 C5orf67F2Z3F1 127 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 H3BNC9 293 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 MED24O75448 989 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 RB1P06400 928 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 LINC00271P0C7V0 271 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 MUTP22033 750 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 BMPR1AP36894 532 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 PRPHP41219 470 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 PTGDRQ13258 359 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 PDIA5Q14554 519 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 MXD4Q14582 209 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-207ENST00000430858 CCDC85BQ15834 202 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-207ENST00000430858 SRGAP1Q7Z6B7 1085 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 FERMT3Q86UX7 667 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 MICALL1Q8N3F8 863 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 PIGOQ8TEQ8 1089 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 PRPF31Q8WWY3 499 aaKnown RBP10.94□□□□□ -0.66
HDAC6-207ENST00000430858 TMEM143Q96AN5 459 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 NACC1Q96RE7 527 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 ATP6V0A4Q9HBG4 840 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 IFT122Q9HBG6 1241 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.94□□□□□ -0.66
HDAC6-207ENST00000430858 BMP2KQ9NSY1 1161 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-207ENST00000430858 DACT1Q9NYF0 836 aa10.94□□□□□ -0.66
HDAC6-207ENST00000430858 DBR1Q9UK59 544 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms