RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 SARSP49591 514 aaKnown RBP11.47□□□□□ -0.57
ATG4B-212ENST00000430617 GHRHRQ02643 423 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 STK3Q13188 491 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 TMEM266Q2M3C6 531 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 CCDC178Q5BJE1 867 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 PPM1JQ5JR12 505 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 ATAT1Q5SQI0 421 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 IFIT1BQ5T764 474 aaKnown RBP11.47□□□□□ -0.57
ATG4B-212ENST00000430617 LRRC55Q6ZSA7 311 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 TMC7Q7Z402 723 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 RSPH3Q86UC2 560 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 MICU3Q86XE3 530 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 SPRYD3Q8NCJ5 442 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 NSUN7Q8NE18 718 aaKnown RBP11.47□□□□□ -0.57
ATG4B-212ENST00000430617 SMARCC2Q8TAQ2 1214 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 RSAD2Q8WXG1 361 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 MYL10Q9BUA6 226 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 SLKQ9H2G2 1235 aaPredicted RBP11.47□□□□□ -0.57
ATG4B-212ENST00000430617 TBC1D17Q9HA65 648 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 NCOA5Q9HCD5 579 aaKnown RBP11.47□□□□□ -0.57
ATG4B-212ENST00000430617 NGRNQ9NPE2 291 aaKnown RBP11.47□□□□□ -0.57
ATG4B-212ENST00000430617 WNT16Q9UBV4 365 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 ZNF215Q9UL58 517 aaPredicted RBP11.47□□□□□ -0.57
ATG4B-212ENST00000430617 MRPL11Q9Y3B7 192 aaKnown RBP11.47□□□□□ -0.57
ATG4B-212ENST00000430617 PCDHB7Q9Y5E2 793 aa11.47□□□□□ -0.57
ATG4B-212ENST00000430617 MYH9P35579 1960 aaKnown RBP11.47□□□□□ -0.57
ATG4B-212ENST00000430617 IGSF9BQ9UPX0 1349 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 GOLGA8AA7E2F4 631 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 PRR5-ARHGAP8B1AHC4 643 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 HSP90AA1P07900 732 aaKnown RBP11.46□□□□□ -0.57
ATG4B-212ENST00000430617 FGFR1P11362 822 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 EPCAMP16422 314 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 RXRAP19793 462 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 METAP2P50579 478 aaKnown RBP eCLIP11.46□□□□□ -0.57
ATG4B-212ENST00000430617 ARHGAP8P85298 464 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 SP4Q02446 784 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 TROAPQ12815 778 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 PPFIA1Q13136 1202 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 PAK2Q13177 524 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 GRIK4Q16099 956 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 XRRA1Q6P2D8 792 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 METTL7BQ6UX53 244 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 TMC5Q6UXY8 1006 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 NFXL1Q6ZNB6 911 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 RAB11FIP4Q86YS3 637 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 TMTC2Q8N394 836 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 MRPL43Q8N983 215 aaKnown RBP11.46□□□□□ -0.57
ATG4B-212ENST00000430617 LLPHQ9BRT6 129 aaKnown RBP11.46□□□□□ -0.57
ATG4B-212ENST00000430617 FAM49AQ9H0Q0 323 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-212ENST00000430617 PARD6AQ9NPB6 346 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 FAM217BQ9NTX9 383 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-212ENST00000430617 PUF60Q9UHX1 559 aaKnown RBP11.46□□□□□ -0.57
ATG4B-212ENST00000430617 CIZ1Q9ULV3 898 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-212ENST00000430617 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-212ENST00000430617 SLC12A7Q9Y666 1083 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 SQORQ9Y6N5 450 aa11.46□□□□□ -0.57
ATG4B-212ENST00000430617 GREB1Q4ZG55 1949 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 JAK2O60674 1132 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 PPP1R11O60927 126 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-212ENST00000430617 N4BP1O75113 896 aaKnown RBP11.45□□□□□ -0.58
ATG4B-212ENST00000430617 LRRN2O75325 713 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 LAG3P18627 525 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 MARK3P27448 753 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 CDC27P30260 824 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 CCND2P30279 289 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 CCT2P78371 535 aaKnown RBP11.45□□□□□ -0.58
ATG4B-212ENST00000430617 MRPS9P82933 396 aaKnown RBP11.45□□□□□ -0.58
ATG4B-212ENST00000430617 LMNB2Q03252 620 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 NTRK3Q16288 839 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 GPATCH4Q5T3I0 446 aaKnown RBP11.45□□□□□ -0.58
ATG4B-212ENST00000430617 KCNT2Q6UVM3 1135 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 GPR161Q8N6U8 529 aaKnown RBP11.45□□□□□ -0.58
ATG4B-212ENST00000430617 ACSF2Q96CM8 615 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-212ENST00000430617 JMJD4Q9H9V9 463 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 VAT1LQ9HCJ6 419 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 SIT1Q9Y3P8 196 aa11.45□□□□□ -0.58
ATG4B-212ENST00000430617 STK36Q9NRP7 1315 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 SPATA31C2B4DYI2 1134 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 RFX1P22670 979 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 GJB2P29033 226 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 IGBP1P78318 339 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 NFX1Q12986 1120 aaKnown RBP11.44□□□□□ -0.58
ATG4B-212ENST00000430617 SMC1AQ14683 1233 aaKnown RBP11.44□□□□□ -0.58
ATG4B-212ENST00000430617 RTN1Q16799 776 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 IER5Q5VY09 327 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 CATIPQ7Z7H3 387 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 PNMA1Q8ND90 353 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 MAP3K14Q99558 947 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 FOXQ1Q9C009 403 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 KAT14Q9H8E8 782 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 NAP1L2Q9ULW6 460 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-212ENST00000430617 SMC3Q9UQE7 1217 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 TRPV2Q9Y5S1 764 aa11.44□□□□□ -0.58
ATG4B-212ENST00000430617 CNTNAP5Q8WYK1 1306 aa11.43□□□□□ -0.58
ATG4B-212ENST00000430617 C9IYK1 514 aa11.43□□□□□ -0.58
ATG4B-212ENST00000430617 DTNBO60941 627 aa11.43□□□□□ -0.58
ATG4B-212ENST00000430617 CALM1P0DP23 149 aa11.43□□□□□ -0.58
ATG4B-212ENST00000430617 CALM2P0DP24 149 aa11.43□□□□□ -0.58
ATG4B-212ENST00000430617 CALM3P0DP25 149 aa11.43□□□□□ -0.58
ATG4B-212ENST00000430617 TCF7P36402 384 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms