RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 ATP2A2P16615 1042 aaKnown RBP27.99■■■□□ 2.07
HERPUD2-205ENST00000427455 GRIN1Q05586 938 aa27.99■■■□□ 2.07
HERPUD2-205ENST00000427455 FAM109BQ6ICB4 259 aaPredicted RBP27.99■■■□□ 2.07
HERPUD2-205ENST00000427455 ZNF410Q86VK4 478 aa27.99■■■□□ 2.07
HERPUD2-205ENST00000427455 KCTD17Q8N5Z5 321 aa27.99■■■□□ 2.07
HERPUD2-205ENST00000427455 PHOSPHO2Q8TCD6 241 aa27.99■■■□□ 2.07
HERPUD2-205ENST00000427455 NT5C3AQ9H0P0 336 aa27.99■■■□□ 2.07
HERPUD2-205ENST00000427455 PADI3Q9ULW8 664 aa27.99■■■□□ 2.07
HERPUD2-205ENST00000427455 NOC2LQ9Y3T9 749 aaKnown RBP27.99■■■□□ 2.07
HERPUD2-205ENST00000427455 COL4A3BPQ9Y5P4 624 aa27.99■■■□□ 2.07
HERPUD2-205ENST00000427455 UBA7P41226 1012 aa27.98■■■□□ 2.07
HERPUD2-205ENST00000427455 STK38Q15208 465 aa27.98■■■□□ 2.07
HERPUD2-205ENST00000427455 ZRSR1Q15695 479 aaKnown RBP27.98■■■□□ 2.07
HERPUD2-205ENST00000427455 ODR4Q5SWX8 454 aa27.98■■■□□ 2.07
HERPUD2-205ENST00000427455 CABP7Q86V35 215 aa27.98■■■□□ 2.07
HERPUD2-205ENST00000427455 CDK5RAP3Q96JB5 506 aa27.98■■■□□ 2.07
HERPUD2-205ENST00000427455 BHMT2Q9H2M3 363 aa27.98■■■□□ 2.07
HERPUD2-205ENST00000427455 DNM3Q9UQ16 869 aa27.98■■■□□ 2.07
HERPUD2-205ENST00000427455 PTPRSQ13332 1948 aa27.97■■■□□ 2.07
HERPUD2-205ENST00000427455 EIF4BP23588 611 aaKnown RBP27.97■■■□□ 2.07
HERPUD2-205ENST00000427455 ATL3Q6DD88 541 aa27.97■■■□□ 2.07
HERPUD2-205ENST00000427455 FAM43BQ6ZT52 329 aaPredicted RBP27.97■■■□□ 2.07
HERPUD2-205ENST00000427455 LINC00301Q8NCQ3 95 aa27.97■■■□□ 2.07
HERPUD2-205ENST00000427455 MCPH1Q8NEM0 835 aa27.97■■■□□ 2.07
HERPUD2-205ENST00000427455 PRPF31Q8WWY3 499 aaKnown RBP27.97■■■□□ 2.07
HERPUD2-205ENST00000427455 LRCH3Q96II8 777 aa27.97■■■□□ 2.07
HERPUD2-205ENST00000427455 ZNF668Q96K58 619 aaPredicted RBP27.97■■■□□ 2.07
HERPUD2-205ENST00000427455 NLRP4Q96MN2 994 aa27.97■■■□□ 2.07
HERPUD2-205ENST00000427455 FTHL17Q9BXU8 183 aa27.97■■■□□ 2.07
HERPUD2-205ENST00000427455 GPR182O15218 404 aa27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 YEATS4O95619 227 aa27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 EYA4O95677 639 aa27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 DARSP14868 501 aaKnown RBP27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 DEFB103AP81534 67 aa27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 FOXD4L6Q3SYB3 417 aaPredicted RBP27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 PADI6Q6TGC4 694 aa27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 FOXD4L3Q6VB84 417 aaPredicted RBP27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 FAM228AQ86W67 206 aa27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 PNMA5Q96PV4 448 aa27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 GCOM2Q9BZD3 368 aaPredicted RBP27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 CSRNP2Q9H175 543 aa27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 ERVK-5Q9HDB9 667 aa27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 TFIP11Q9UBB9 837 aaKnown RBP27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 ZDHHC9Q9Y397 364 aa27.96■■■□□ 2.07
HERPUD2-205ENST00000427455 A0A087WZ62 844 aa27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 GRXCR1A8MXD5 290 aa27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 E9PMD0 336 aa27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 ASAP2O43150 1006 aa27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 AMHP03971 560 aa27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 LAMTOR4Q0VGL1 99 aa27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 NFX1Q12986 1120 aaKnown RBP27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 GRB10Q13322 594 aa27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 MXD4Q14582 209 aaPredicted RBP27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 TMEM119Q4V9L6 283 aa27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 KSR1Q8IVT5 923 aa27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 KRI1Q8N9T8 703 aaKnown RBP27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 CALML4Q96GE6 196 aa27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 FDXACB1Q9BRP7 624 aaPredicted RBP27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 ST3GAL5Q9UNP4 418 aa27.95■■■□□ 2.06
HERPUD2-205ENST00000427455 SPTLC2O15270 562 aa27.94■■■□□ 2.06
HERPUD2-205ENST00000427455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.94■■■□□ 2.06
HERPUD2-205ENST00000427455 KCNK18Q7Z418 384 aa27.94■■■□□ 2.06
HERPUD2-205ENST00000427455 HERC6Q8IVU3 1022 aa27.94■■■□□ 2.06
HERPUD2-205ENST00000427455 POLR3FQ9H1D9 316 aaPredicted RBP27.94■■■□□ 2.06
HERPUD2-205ENST00000427455 DAXXQ9UER7 740 aaPredicted RBP27.94■■■□□ 2.06
HERPUD2-205ENST00000427455 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 PPP6R2O75170 966 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 CYP11B2P19099 503 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 ARL2P36404 184 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 RAB30Q15771 203 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 GPR153Q6NV75 609 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 MYOCDQ8IZQ8 938 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 RASSF8Q8NHQ8 419 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 CLIC6Q96NY7 704 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 PBX4Q9BYU1 374 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 INO80BQ9C086 356 aaPredicted RBP27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 CCSER1Q9C0I3 900 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 CFAP45Q9UL16 551 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 GBF1Q92538 1859 aa27.93■■■□□ 2.06
HERPUD2-205ENST00000427455 DNM1Q05193 864 aaKnown RBP27.92■■■□□ 2.06
HERPUD2-205ENST00000427455 ASAP3Q8TDY4 903 aa27.92■■■□□ 2.06
HERPUD2-205ENST00000427455 LINC01599Q8WXQ3 324 aa27.92■■■□□ 2.06
HERPUD2-205ENST00000427455 PLIN2Q99541 437 aa27.92■■■□□ 2.06
HERPUD2-205ENST00000427455 TMX1Q9H3N1 280 aa27.92■■■□□ 2.06
HERPUD2-205ENST00000427455 IFT122Q9HBG6 1241 aa27.92■■■□□ 2.06
HERPUD2-205ENST00000427455 SZT2Q5T011 3432 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 SRGAP2CP0DJJ0 459 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 SFPQP23246 707 aaKnown RBP eCLIP27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 DNAJB2P25686 324 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 TXLNAP40222 546 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 TFDP1Q14186 410 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 KARSQ15046 597 aaKnown RBP27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 SPECC1Q5M775 1068 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 FAM102BQ5T8I3 360 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 MAEAQ7L5Y9 396 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 RNF149Q8NC42 400 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 KCNG4Q8TDN1 519 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 SYMPKQ92797 1274 aaKnown RBP27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 EPSTI1Q96J88 318 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 TSPYL2Q9H2G4 693 aaPredicted RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms