RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 FAM43BQ6ZT52 329 aaPredicted RBP25.17■■□□□ 1.62
SDHAP1-204ENST00000427415 ZNF410Q86VK4 478 aa25.17■■□□□ 1.62
SDHAP1-204ENST00000427415 RHPN2Q8IUC4 686 aa25.17■■□□□ 1.62
SDHAP1-204ENST00000427415 MCPH1Q8NEM0 835 aa25.17■■□□□ 1.62
SDHAP1-204ENST00000427415 TMEM143Q96AN5 459 aa25.17■■□□□ 1.62
SDHAP1-204ENST00000427415 CALML4Q96GE6 196 aa25.17■■□□□ 1.62
SDHAP1-204ENST00000427415 ADAMTS10Q9H324 1103 aa25.17■■□□□ 1.62
SDHAP1-204ENST00000427415 AGO3Q9H9G7 860 aaKnown RBP25.17■■□□□ 1.62
SDHAP1-204ENST00000427415 CDHR5Q9HBB8 845 aa25.17■■□□□ 1.62
SDHAP1-204ENST00000427415 FBXO2Q9UK22 296 aaPredicted RBP25.17■■□□□ 1.62
SDHAP1-204ENST00000427415 COL4A3BPQ9Y5P4 624 aa25.17■■□□□ 1.62
SDHAP1-204ENST00000427415 TCHHQ07283 1943 aa25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 ASAP2O43150 1006 aa25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 ANP32AP39687 249 aaKnown RBP25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 SMAD3P84022 425 aaKnown RBP25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 GRIN1Q05586 938 aa25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 KRI1Q8N9T8 703 aaKnown RBP25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 LINC00301Q8NCQ3 95 aa25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 RASSF8Q8NHQ8 419 aa25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 TMEM40Q8WWA1 233 aa25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 GCOM2Q9BZD3 368 aaPredicted RBP25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 BHMT2Q9H2M3 363 aa25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 XPNPEP1Q9NQW7 623 aa25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 TFIP11Q9UBB9 837 aaKnown RBP25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 DAXXQ9UER7 740 aaPredicted RBP25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 CFAP45Q9UL16 551 aa25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 ATP6V1DQ9Y5K8 247 aa25.16■■□□□ 1.62
SDHAP1-204ENST00000427415 GPR182O15218 404 aa25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 EYA4O95677 639 aa25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 ATP2A2P16615 1042 aaKnown RBP25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 MXD4Q14582 209 aaPredicted RBP25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 FOXD4L6Q3SYB3 417 aaPredicted RBP25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 PADI6Q6TGC4 694 aa25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 FOXD4L3Q6VB84 417 aaPredicted RBP25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 PHOSPHO2Q8TCD6 241 aa25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 NLRP4Q96MN2 994 aa25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 FTHL17Q9BXU8 183 aa25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 CSRNP2Q9H175 543 aa25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 PADI3Q9ULW8 664 aa25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 NOC2LQ9Y3T9 749 aaKnown RBP25.15■■□□□ 1.62
SDHAP1-204ENST00000427415 MYH11P35749 1972 aa25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 SPTLC2O15270 562 aa25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 AMHP03971 560 aa25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 DARSP14868 501 aaKnown RBP25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 EIF4BP23588 611 aaKnown RBP25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 TXLNAP40222 546 aa25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 GRB10Q13322 594 aa25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 PRPF31Q8WWY3 499 aaKnown RBP25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 ZNF668Q96K58 619 aaPredicted RBP25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 PNMA5Q96PV4 448 aa25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 INO80BQ9C086 356 aaPredicted RBP25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 ZDHHC9Q9Y397 364 aa25.14■■□□□ 1.62
SDHAP1-204ENST00000427415 A0A087WZ62 844 aa25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 E9PMD0 336 aa25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 PPP6R2O75170 966 aa25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 CYP11B2P19099 503 aa25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 LAMTOR4Q0VGL1 99 aa25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 NFX1Q12986 1120 aaKnown RBP25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 TMEM119Q4V9L6 283 aa25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 KCNG4Q8TDN1 519 aa25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 FDXACB1Q9BRP7 624 aaPredicted RBP25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 CCSER1Q9C0I3 900 aa25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 ERVK-5Q9HDB9 667 aa25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 TTC3P53804 2025 aa25.13■■□□□ 1.61
SDHAP1-204ENST00000427415 SOX1O00570 391 aaPredicted RBP25.12■■□□□ 1.61
SDHAP1-204ENST00000427415 FXR1P51114 621 aaKnown RBP eCLIP25.12■■□□□ 1.61
SDHAP1-204ENST00000427415 TFDP1Q14186 410 aa25.12■■□□□ 1.61
SDHAP1-204ENST00000427415 FAM109BQ6ICB4 259 aaPredicted RBP25.12■■□□□ 1.61
SDHAP1-204ENST00000427415 FAM228AQ86W67 206 aa25.12■■□□□ 1.61
SDHAP1-204ENST00000427415 CLIC6Q96NY7 704 aa25.12■■□□□ 1.61
SDHAP1-204ENST00000427415 PLIN2Q99541 437 aa25.12■■□□□ 1.61
SDHAP1-204ENST00000427415 POLR3FQ9H1D9 316 aaPredicted RBP25.12■■□□□ 1.61
SDHAP1-204ENST00000427415 ST3GAL5Q9UNP4 418 aa25.12■■□□□ 1.61
SDHAP1-204ENST00000427415 SFPQP23246 707 aaKnown RBP eCLIP25.11■■□□□ 1.61
SDHAP1-204ENST00000427415 NUCB2P80303 420 aa25.11■■□□□ 1.61
SDHAP1-204ENST00000427415 DEFB103AP81534 67 aa25.11■■□□□ 1.61
SDHAP1-204ENST00000427415 DNM1Q05193 864 aaKnown RBP25.11■■□□□ 1.61
SDHAP1-204ENST00000427415 RAB30Q15771 203 aa25.11■■□□□ 1.61
SDHAP1-204ENST00000427415 KCNK18Q7Z418 384 aa25.11■■□□□ 1.61
SDHAP1-204ENST00000427415 KSR1Q8IVT5 923 aa25.11■■□□□ 1.61
SDHAP1-204ENST00000427415 LAMA2P24043 3122 aaKnown RBP25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 ARL2P36404 184 aa25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 PHKA2P46019 1235 aa25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 KARSQ15046 597 aaKnown RBP25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 FAM102BQ5T8I3 360 aa25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 MAEAQ7L5Y9 396 aa25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 HERC6Q8IVU3 1022 aa25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 MYOCDQ8IZQ8 938 aa25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 RNF149Q8NC42 400 aa25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 SYMPKQ92797 1274 aaKnown RBP25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 LRCH3Q96II8 777 aa25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 CCDC39Q9UFE4 941 aa25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 MSRAQ9UJ68 235 aa25.1■■□□□ 1.61
SDHAP1-204ENST00000427415 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.09■■□□□ 1.61
SDHAP1-204ENST00000427415 GRXCR1A8MXD5 290 aa25.09■■□□□ 1.61
SDHAP1-204ENST00000427415 RBAK-RBAKDNI3L0D1 243 aa25.09■■□□□ 1.61
SDHAP1-204ENST00000427415 SSBP05455 408 aaKnown RBP eCLIP25.09■■□□□ 1.61
SDHAP1-204ENST00000427415 SRGAP2CP0DJJ0 459 aa25.09■■□□□ 1.61
SDHAP1-204ENST00000427415 PLCG1P19174 1290 aa25.09■■□□□ 1.61
SDHAP1-204ENST00000427415 NCLP19338 710 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms