RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 ECT2Q9H8V3 914 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 KRT82Q9NSB4 513 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 OCA2Q04671 838 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 EN1Q05925 392 aaPredicted RBP14.79□□□□□ -0.04
SREBF2-202ENST00000424354 GADL1Q6ZQY3 521 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 LRRC53A6NM62 1247 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 KRT38O76015 456 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 HSPA4LO95757 839 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 RCAN1P53805 252 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 CAPRIN2Q6IMN6 1127 aaKnown RBP14.79□□□□□ -0.04
SREBF2-202ENST00000424354 ATP6V1E2Q96A05 226 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.79□□□□□ -0.042e-8■■□□□ 13
SREBF2-202ENST00000424354 ZCCHC17Q9NP64 241 aaKnown RBP14.79□□□□□ -0.04
SREBF2-202ENST00000424354 ZBED1O96006 694 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 CHRNA3P32297 505 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 ACTN3Q08043 901 aaPredicted RBP14.79□□□□□ -0.04
SREBF2-202ENST00000424354 BZW1Q7L1Q6 419 aaKnown RBP14.79□□□□□ -0.04
SREBF2-202ENST00000424354 TTC13Q8NBP0 860 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 SLC24A3Q9HC58 644 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 LEMD3Q9Y2U8 911 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 ARHGAP10A1A4S6 786 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 CDR2Q01850 454 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 SURF1Q15526 300 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 C1orf146Q5VVC0 180 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 GSPT2Q8IYD1 628 aaKnown RBP14.79□□□□□ -0.04
SREBF2-202ENST00000424354 TTC17Q96AE7 1141 aa14.79□□□□□ -0.04
SREBF2-202ENST00000424354 ZNF233A6NK53 670 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 RASSF10A6NK89 507 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 DYDC2Q96IM9 177 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 SYNJ2BP-COX16A0A087WUM0 186 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 PVALEFA0A1B0GWK0 134 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 A0A1W2PQC6 194 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 TCP10L2B9ZVM9 353 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 SASH1O94885 1247 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 DOK7Q18PE1 504 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 FAM47EQ6ZV65 393 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 COX16Q9P0S2 106 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 PALM3A6NDB9 673 aaPredicted RBP14.78□□□□□ -0.04
SREBF2-202ENST00000424354 MYO1EQ12965 1108 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 KLC3Q6P597 504 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 EP400NLQ6ZTU2 488 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 KLC2Q9H0B6 622 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 GPC5P78333 572 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 MRPS25P82663 173 aaKnown RBP14.78□□□□□ -0.04
SREBF2-202ENST00000424354 NAA30Q147X3 362 aaPredicted RBP14.78□□□□□ -0.04
SREBF2-202ENST00000424354 SLC15A2Q16348 729 aa14.78□□□□□ -0.04
SREBF2-202ENST00000424354 MEFVO15553 781 aaPredicted RBP14.77□□□□□ -0.04
SREBF2-202ENST00000424354 CHEK2O96017 543 aa14.77□□□□□ -0.04
SREBF2-202ENST00000424354 LLGL1Q15334 1064 aa14.77□□□□□ -0.04
SREBF2-202ENST00000424354 CEP19Q96LK0 163 aa14.77□□□□□ -0.04
SREBF2-202ENST00000424354 TGS1Q96RS0 853 aaKnown RBP14.77□□□□□ -0.04
SREBF2-202ENST00000424354 SH3GL3Q99963 347 aa14.77□□□□□ -0.04
SREBF2-202ENST00000424354 ANO3Q9BYT9 981 aa14.77□□□□□ -0.04
SREBF2-202ENST00000424354 DNAJC12Q9UKB3 198 aa14.77□□□□□ -0.04
SREBF2-202ENST00000424354 MEIS1O00470 390 aa14.77□□□□□ -0.04
SREBF2-202ENST00000424354 PDHA1P08559 390 aa14.77□□□□□ -0.04
SREBF2-202ENST00000424354 DYNLL1P63167 89 aaKnown RBP14.77□□□□□ -0.04
SREBF2-202ENST00000424354 NFAT5O94916 1531 aa14.77□□□□□ -0.04
SREBF2-202ENST00000424354 PRKAB2O43741 272 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 ANO5Q75V66 913 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 FBXL13Q8NEE6 735 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 DHX38Q92620 1227 aaKnown RBP14.77□□□□□ -0.05
SREBF2-202ENST00000424354 KANSL2Q9H9L4 492 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 BATF3Q9NR55 127 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 DNAJC17Q9NVM6 304 aaKnown RBP14.77□□□□□ -0.05
SREBF2-202ENST00000424354 NWD2Q9ULI1 1742 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 XDHP47989 1333 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 HNRNPCL1O60812 293 aaKnown RBP14.77□□□□□ -0.05
SREBF2-202ENST00000424354 ORC2Q13416 577 aaPredicted RBP14.77□□□□□ -0.05
SREBF2-202ENST00000424354 TAF1BQ53T94 588 aaPredicted RBP14.77□□□□□ -0.05
SREBF2-202ENST00000424354 MIS18BP1Q6P0N0 1132 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 NFRKBQ6P4R8 1299 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 MTFR1LQ9H019 292 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 ETNK1Q9HBU6 452 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 NDE1Q9NXR1 346 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 GGPS1O95749 300 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 GFPT1Q06210 699 aaPredicted RBP14.77□□□□□ -0.05
SREBF2-202ENST00000424354 ANKRD7Q92527 254 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 STAMBPL1Q96FJ0 436 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 MTA3Q9BTC8 594 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 ASAP1Q9ULH1 1129 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 TRIM33Q9UPN9 1127 aa14.77□□□□□ -0.05
SREBF2-202ENST00000424354 KPNA7A9QM74 516 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 TAC1P20366 129 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 USPL1Q5W0Q7 1092 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 KIAA0825Q8IV33 1275 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 RTKN2Q8IZC4 609 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 FGD4Q96M96 766 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 OSBPL1AQ9BXW6 950 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 BRAFP15056 766 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 PRCPP42785 496 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 ACAD11Q709F0 780 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 TRMT10CQ7L0Y3 403 aaKnown RBP14.76□□□□□ -0.05
SREBF2-202ENST00000424354 FAM149B1Q96BN6 582 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 POLR3CQ9BUI4 534 aaPredicted RBP14.76□□□□□ -0.05
SREBF2-202ENST00000424354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.76□□□□□ -0.05
SREBF2-202ENST00000424354 DDIT3P35638 169 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 ARHGEF6Q15052 776 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 C16orf87Q6PH81 154 aa14.76□□□□□ -0.05
SREBF2-202ENST00000424354 DGKHQ86XP1 1220 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms