RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 ANO3Q9BYT9 981 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 PDGFDQ9GZP0 370 aaPredicted RBP10.59□□□□□ -0.71
USP54-205ENST00000424265 ANKZF1Q9H8Y5 726 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 RAB21Q9UL25 225 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 hCG_1642624A0A1W2PR95 340 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 PSMA7O14818 248 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 CHGBP05060 677 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 TXKP42681 527 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 AARSP49588 968 aaKnown RBP eCLIP10.59□□□□□ -0.71
USP54-205ENST00000424265 FANCCQ00597 558 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 TROAPQ12815 778 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 KCTD16Q68DU8 428 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 SLC17A8Q8NDX2 589 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 PCDHA12Q9UN75 941 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 SH3GLB1Q9Y371 365 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 TARSL2A2RTX5 802 aaKnown RBP10.59□□□□□ -0.71
USP54-205ENST00000424265 H0YCG3 227 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 PDLIM1O00151 329 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 NR1I2O75469 434 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 FAM13AO94988 1023 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 LDHAP00338 332 aaKnown RBP10.59□□□□□ -0.71
USP54-205ENST00000424265 KCNA2P16389 499 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 USP11P51784 963 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 GUCY2FP51841 1108 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 HMGCS2P54868 508 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 ASIC1P78348 528 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 POSTNQ15063 836 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 FAM160B1Q5W0V3 765 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 SNX29Q8TEQ0 813 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 CARD9Q9H257 536 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 GPHNQ9NQX3 736 aaPredicted RBP10.59□□□□□ -0.71
USP54-205ENST00000424265 KCNQ5Q9NR82 932 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 SAMD15Q9P1V8 674 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 LARSQ9P2J5 1176 aaKnown RBP10.59□□□□□ -0.71
USP54-205ENST00000424265 SUCLA2Q9P2R7 463 aaPredicted RBP10.59□□□□□ -0.71
USP54-205ENST00000424265 MAPK8IP1Q9UQF2 711 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 PALM3A6NDB9 673 aaPredicted RBP10.59□□□□□ -0.71
USP54-205ENST00000424265 HARSP12081 509 aaKnown RBP10.59□□□□□ -0.71
USP54-205ENST00000424265 STAT3P40763 770 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 MATR3P43243 847 aaKnown RBP eCLIP10.59□□□□□ -0.71
USP54-205ENST00000424265 OAZ1P54368 228 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 POTEEQ6S8J3 1075 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 MIER3Q7Z3K6 550 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 CABP7Q86V35 215 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 UHMK1Q8TAS1 419 aaKnown RBP10.59□□□□□ -0.71
USP54-205ENST00000424265 NSUN6Q8TEA1 469 aaKnown RBP10.59□□□□□ -0.71
USP54-205ENST00000424265 ABHD8Q96I13 439 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 SELENOOQ9BVL4 669 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 DDX4Q9NQI0 724 aaKnown RBP10.59□□□□□ -0.71
USP54-205ENST00000424265 TMEM98Q9Y2Y6 226 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 PFASO15067 1338 aa10.59□□□□□ -0.71
USP54-205ENST00000424265 A0A1B0GVL5 298 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 SPECC1L-ADORA2AF8WAN1 911 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 ALDH1A1P00352 501 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 CDC27P30260 824 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 CETN1Q12798 172 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 RESTQ13127 1097 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 NCCRP1Q6ZVX7 275 aaPredicted RBP10.58□□□□□ -0.72
USP54-205ENST00000424265 DAGLBQ8NCG7 672 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 RPGRIP1Q96KN7 1286 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 RNF146Q9NTX7 359 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 ZNF148Q9UQR1 794 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 LRP5O75197 1615 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 CFAP73A6NFT4 308 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 NDUFB5O43674 189 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 HUNKP57058 714 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 AGAP3Q96P47 875 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 CCT8L2Q96SF2 557 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 NDNQ99608 321 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 WDR18Q9BV38 432 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 NSRP1Q9H0G5 558 aaKnown RBP10.58□□□□□ -0.72
USP54-205ENST00000424265 ATRNL1Q5VV63 1379 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 SOCS7O14512 581 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 SYF2O95926 243 aaKnown RBP10.58□□□□□ -0.72
USP54-205ENST00000424265 PTGER2P43116 358 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 NNTQ13423 1086 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 SNRNP48Q6IEG0 339 aaKnown RBP10.58□□□□□ -0.72
USP54-205ENST00000424265 CHADLQ6NUI6 762 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 CRELD2Q6UXH1 353 aaPredicted RBP10.58□□□□□ -0.72
USP54-205ENST00000424265 NEK9Q8TD19 979 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 CDCA5Q96FF9 252 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 SIKE1Q9BRV8 207 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 MYPNQ86TC9 1320 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 MANSC4A6NHS7 340 aaPredicted RBP10.58□□□□□ -0.72
USP54-205ENST00000424265 KDM1AO60341 852 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 SCTRP47872 440 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 CFAP157Q5JU67 520 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 NBPF12Q5TAG4 269 aaPredicted RBP10.58□□□□□ -0.72
USP54-205ENST00000424265 OLFML2BQ68BL8 750 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 TATDN1Q6P1N9 297 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 CNNM4Q6P4Q7 775 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 REM2Q8IYK8 340 aaPredicted RBP10.58□□□□□ -0.72
USP54-205ENST00000424265 TBCKQ8TEA7 893 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 CASP10Q92851 521 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 COA7Q96BR5 231 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 CAPZA3Q96KX2 299 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 FAM20AQ96MK3 541 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 NUP58Q9BVL2 599 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 ZFYVE28Q9HCC9 887 aa10.58□□□□□ -0.72
USP54-205ENST00000424265 DMAP1Q9NPF5 467 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms