RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 UBAC1Q9BSL1 405 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 AZI2Q9H6S1 392 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 JPH1Q9HDC5 661 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 EPS15L1Q9UBC2 864 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 FBXO4Q9UKT5 387 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 CA14Q9ULX7 337 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 GINS2Q9Y248 185 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 COL1A2P08123 1366 aa12.03□□□□□ -0.48
RAPGEF1-205ENST00000419442 MYH15Q9Y2K3 1946 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 SLC26A2P50443 739 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 STAT5BP51692 787 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 BCAR1P56945 870 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 MTMR1Q13613 665 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 COL9A2Q14055 689 aaPredicted RBP12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 SPECC1Q5M775 1068 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 DDX53Q86TM3 631 aaKnown RBP12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 ZNF598Q86UK7 904 aaKnown RBP12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 TMEM173Q86WV6 379 aaPredicted RBP12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 ABI1Q8IZP0 508 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 ZBTB44Q8NCP5 570 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 PJA1Q8NG27 643 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 GPR152Q8TDT2 470 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 AUTS2Q8WXX7 1259 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 NELL1Q92832 810 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 TMEM169Q96HH4 297 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 KRT23Q9C075 422 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 JADE2Q9NQC1 790 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 ARHGEF3Q9NR81 526 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 SLC2A4RGQ9NR83 387 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 PCDHGA2Q9Y5H1 932 aa12.02□□□□□ -0.49
RAPGEF1-205ENST00000419442 MTCL1Q9Y4B5 1905 aaKnown RBP12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 IGKV6D-21A0A0A0MT36 114 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 CARNS1A5YM72 827 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 HBP1O60381 514 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 LILRB5O75023 590 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 GPR32O75388 356 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 ATG7O95352 703 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 PAPLNO95428 1278 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 METAP2P50579 478 aaKnown RBP eCLIP12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 MFAP1P55081 439 aaKnown RBP12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 STARD6P59095 220 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 HNRNPUQ00839 825 aaKnown RBP eCLIP12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 C20orf194Q5TEA3 1177 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 CYP26C1Q6V0L0 522 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 CUL5Q93034 780 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 OSMRQ99650 979 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 MRPL9Q9BYD2 267 aaKnown RBP12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 EPC1Q9H2F5 836 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 WDR6Q9NNW5 1121 aaKnown RBP12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 SLC9A2Q9UBY0 812 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 NFASCO94856 1347 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 WDR81Q562E7 1941 aa12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 MYH9P35579 1960 aaKnown RBP12.01□□□□□ -0.49
RAPGEF1-205ENST00000419442 ZBTB42B2RXF5 422 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 NT5C1B-RDH14C9J2C7 533 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 CA8P35219 290 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 ALDH7A1P49419 539 aaKnown RBP12□□□□□ -0.49
RAPGEF1-205ENST00000419442 CLCN4P51793 760 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 ACTR2P61160 394 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 WTAPQ15007 396 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 PTPN14Q15678 1187 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 KIZQ2M2Z5 673 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 RSPH1Q8WYR4 309 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 IGSF21Q96ID5 467 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 CHAMP1Q96JM3 812 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 CNNM2Q9H8M5 875 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 PARD6AQ9NPB6 346 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 PKD2L1Q9P0L9 805 aa12□□□□□ -0.49
RAPGEF1-205ENST00000419442 SMG5Q9UPR3 1016 aaKnown RBP12□□□□□ -0.49
RAPGEF1-205ENST00000419442 A0A0U1RQF3 1178 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 ANHXE9PGG2 379 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 SLC30A4O14863 429 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 LILRB3O75022 631 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 PDE1AP54750 535 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 TROAPQ12815 778 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 ZNF484Q5JVG2 852 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 DCLRE1AQ6PJP8 1040 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 TMEM87AQ8NBN3 555 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 HELQQ8TDG4 1101 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 BCL7CQ8WUZ0 217 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 SECISBP2LQ93073 1101 aaKnown RBP11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 KLHL5Q96PQ7 755 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 MYADMQ96S97 322 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 DDX23Q9BUQ8 820 aaKnown RBP11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 VN1R3Q9BXE9 311 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 FOXQ1Q9C009 403 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 RALYQ9UKM9 306 aaKnown RBP11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 CLUHO75153 1309 aa11.99□□□□□ -0.49
RAPGEF1-205ENST00000419442 COL4A3Q01955 1670 aa11.98□□□□□ -0.49
RAPGEF1-205ENST00000419442 TBC1D4O60343 1298 aa11.98□□□□□ -0.49
RAPGEF1-205ENST00000419442 LRRN2O75325 713 aa11.98□□□□□ -0.49
RAPGEF1-205ENST00000419442 C22orf31O95567 290 aa11.98□□□□□ -0.49
RAPGEF1-205ENST00000419442 GBP2P32456 591 aaPredicted RBP11.98□□□□□ -0.49
RAPGEF1-205ENST00000419442 PPM1JQ5JR12 505 aa11.98□□□□□ -0.49
RAPGEF1-205ENST00000419442 CYB5R4Q7L1T6 521 aa11.98□□□□□ -0.49
RAPGEF1-205ENST00000419442 STAMQ92783 540 aa11.98□□□□□ -0.49
RAPGEF1-205ENST00000419442 DSCC1Q9BVC3 393 aa11.98□□□□□ -0.49
RAPGEF1-205ENST00000419442 OSBPL6Q9BZF3 934 aa11.98□□□□□ -0.49
RAPGEF1-205ENST00000419442 ZSCAN32Q9NX65 697 aa11.98□□□□□ -0.49
RAPGEF1-205ENST00000419442 PKD1L2Q7Z442 2459 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms