RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 EFCAB14O75071 495 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 FGFR1P11362 822 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 YWHABP31946 246 aaKnown RBP11.45□□□□□ -0.58
HDLBP-206ENST00000417540 CTNNB1P35222 781 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 PBX3P40426 434 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 DSC3Q14574 896 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 EPHA7Q15375 998 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 IL17AQ16552 155 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 IER5Q5VY09 327 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 CRIPAKQ8N1N5 446 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 PIGOQ8TEQ8 1089 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 NLRP7Q8WX94 980 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 CEP170P1Q96L14 293 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 SCLT1Q96NL6 688 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 FDXACB1Q9BRP7 624 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-206ENST00000417540 NIFKQ9BYG3 293 aaKnown RBP11.45□□□□□ -0.58
HDLBP-206ENST00000417540 MINDY3Q9H8M7 445 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 GPRC5CQ9NQ84 441 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 MTCH2Q9Y6C9 303 aa11.45□□□□□ -0.58
HDLBP-206ENST00000417540 MARCH6O60337 910 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 MAFO75444 373 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-206ENST00000417540 SLITRK3O94933 977 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 EDN1P05305 212 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 P4HBP07237 508 aaKnown RBP11.44□□□□□ -0.58
HDLBP-206ENST00000417540 SPATA31C1P0DKV0 1188 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 DARSP14868 501 aaKnown RBP11.44□□□□□ -0.58
HDLBP-206ENST00000417540 TECP42680 631 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 POLGP54098 1239 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-206ENST00000417540 ERVK-21P61565 698 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 GNL2Q13823 731 aaKnown RBP11.44□□□□□ -0.58
HDLBP-206ENST00000417540 SAFBQ15424 915 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDLBP-206ENST00000417540 LONRF3Q496Y0 759 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 MCTP1Q6DN14 999 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 FERMT3Q86UX7 667 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 RHPN2Q8IUC4 686 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 TPH2Q8IWU9 490 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 C4orf32Q8N8J7 132 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 LRRC15Q8TF66 581 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 ZNF689Q96CS4 500 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-206ENST00000417540 TGS1Q96RS0 853 aaKnown RBP11.44□□□□□ -0.58
HDLBP-206ENST00000417540 ADAM2Q99965 735 aa11.44□□□□□ -0.58
HDLBP-206ENST00000417540 DHX33Q9H6R0 707 aaKnown RBP11.44□□□□□ -0.58
HDLBP-206ENST00000417540 PDCD11Q14690 1871 aaKnown RBP11.44□□□□□ -0.58
HDLBP-206ENST00000417540 TTC28Q96AY4 2481 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 C9IYK1 514 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 B4GALT3O60512 393 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 DGKIO75912 1065 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 COL9A1P20849 921 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 U2AF2P26368 475 aaKnown RBP eCLIP11.43□□□□□ -0.582e-9■■■□□ 15.4
HDLBP-206ENST00000417540 RARRES1P49788 294 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 CRYBB1P53674 252 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-206ENST00000417540 TFF2Q03403 129 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 GRIN1Q05586 938 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 CUL4AQ13619 759 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 CAPSQ13938 189 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 EPC2Q52LR7 807 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 XKR9Q5GH70 373 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 CLLU1OSQ5K130 101 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 FAM102BQ5T8I3 360 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 NPAS4Q8IUM7 802 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 C4orf19Q8IY42 314 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 SLFN12Q8IYM2 578 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 FBXO22Q8NEZ5 403 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 BSNDQ8WZ55 320 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 LPPQ93052 612 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 NAP1L4Q99733 375 aaKnown RBP11.43□□□□□ -0.58
HDLBP-206ENST00000417540 KIFC3Q9BVG8 833 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 SUCLA2Q9P2R7 463 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-206ENST00000417540 COL4A3BPQ9Y5P4 624 aa11.43□□□□□ -0.58
HDLBP-206ENST00000417540 DENND3A2RUS2 1198 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 VPS37CA5D8V6 355 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-206ENST00000417540 MAGEB2O15479 319 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 CDC25AP30304 524 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 SARSP49591 514 aaKnown RBP11.42□□□□□ -0.58
HDLBP-206ENST00000417540 FAM173BQ6P4H8 233 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 MAEAQ7L5Y9 396 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 KCNK18Q7Z418 384 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 CATSPER3Q86XQ3 398 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 RNF169Q8NCN4 708 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 MTRQ99707 1265 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 HSD17B14Q9BPX1 270 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 ZSWIM4Q9H7M6 989 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 IFT122Q9HBG6 1241 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 POLD4Q9HCU8 107 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.42□□□□□ -0.58
HDLBP-206ENST00000417540 NRBP2Q9NSY0 501 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 SMC3Q9UQE7 1217 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 PIN4Q9Y237 131 aaKnown RBP11.42□□□□□ -0.58
HDLBP-206ENST00000417540 INSL6Q9Y581 213 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 PLXNA3P51805 1871 aa11.42□□□□□ -0.58
HDLBP-206ENST00000417540 TRIP11Q15643 1979 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 TBKBP1A7MCY6 615 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 GRM6O15303 877 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 B4GALT5O43286 388 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 EIF4BP23588 611 aaKnown RBP11.41□□□□□ -0.58
HDLBP-206ENST00000417540 DNAJB1P25685 340 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 PTGDRQ13258 359 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 BTG3Q14201 252 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-206ENST00000417540 CDR2LQ86X02 465 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-206ENST00000417540 TMEM192Q8IY95 271 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms