RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 ZNF213O14771 459 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 FOXP2O15409 715 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 ECE2O60344 883 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 RAPGEF3O95398 923 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 ITGA2BP08514 1039 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 IDO1P14902 403 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 CCNFP41002 786 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 SLC1A4P43007 532 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 CEBPAP49715 358 aaPredicted RBP6.9□□□□□ -1.3
CCNT1-202ENST00000417344 IFI35P80217 286 aaPredicted RBP6.9□□□□□ -1.3
CCNT1-202ENST00000417344 PLOD1Q02809 727 aaPredicted RBP6.9□□□□□ -1.3
CCNT1-202ENST00000417344 GFPT1Q06210 699 aaPredicted RBP6.9□□□□□ -1.3
CCNT1-202ENST00000417344 EHHADHQ08426 723 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 NR1H3Q13133 447 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 SLC39A6Q13433 755 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 PRPF4BQ13523 1007 aaKnown RBP6.9□□□□□ -1.3
CCNT1-202ENST00000417344 GSTA3Q16772 222 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 RNF43Q68DV7 783 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 ZNF554Q86TJ5 538 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 TTC8Q8TAM2 541 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 FBXO41Q8TF61 875 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 WDR60Q8WVS4 1066 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 SCG3Q8WXD2 468 aaKnown RBP6.9□□□□□ -1.3
CCNT1-202ENST00000417344 TAF4BQ92750 862 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 INPP5DQ92835 1189 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 FAM81BQ96LP2 452 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 ERGIC2Q96RQ1 377 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 OXCT2Q9BYC2 517 aaPredicted RBP6.9□□□□□ -1.3
CCNT1-202ENST00000417344 TXLNGYQ9BZA5 131 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 AZI2Q9H6S1 392 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 DDX21Q9NR30 783 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCNT1-202ENST00000417344 KLHL14Q9P2G3 628 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 HSFX1Q9UBD0 423 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 LNPEPQ9UIQ6 1025 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 PACSIN2Q9UNF0 486 aaPredicted RBP6.9□□□□□ -1.3
CCNT1-202ENST00000417344 RPL26L1Q9UNX3 145 aaKnown RBP6.9□□□□□ -1.3
CCNT1-202ENST00000417344 USP20Q9Y2K6 914 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 USH1CQ9Y6N9 552 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 MON2Q7Z3U7 1717 aa6.9□□□□□ -1.31
CCNT1-202ENST00000417344 PTPRUQ92729 1446 aa6.9□□□□□ -1.31
CCNT1-202ENST00000417344 A0A0J9YVX5 310 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 TLDC2A0PJX2 215 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 TRIM75PA6NK02 468 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 ENTPD5O75356 428 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 SUPT3HO75486 399 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 ETS2P15036 469 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 ALOX15P16050 662 aaPredicted RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 FUT4P22083 530 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 GUCY1A2P33402 732 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 WNT7BP56706 349 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 SESN3P58005 492 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 MCCD1P59942 119 aaPredicted RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 CCDC6Q16204 474 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 HLFQ16534 295 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 LIN52Q52LA3 116 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 C6orf118Q5T5N4 469 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 SNX30Q5VWJ9 437 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 TMC4Q7Z404 712 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 COL23A1Q86Y22 540 aaPredicted RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 LRRC43Q8N309 656 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 NEK9Q8TD19 979 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 ACTRT1Q8TDG2 376 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 SEC14L1Q92503 715 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 KCNN1Q92952 543 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 PPP2R3CQ969Q6 453 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 OSBP2Q969R2 916 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 NR1H4Q96RI1 486 aaPredicted RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 FMO2Q99518 471 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.89□□□□□ -1.315e-10■■■□□ 15.1
CCNT1-202ENST00000417344 PYM1Q9BRP8 204 aaKnown RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 NOC4LQ9BVI4 516 aaKnown RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 STMN4Q9H169 189 aaPredicted RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 DAAM1Q9Y4D1 1078 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 ALKQ9UM73 1620 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 CCDC188H7C350 402 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 KCNK3O14649 394 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 PSMA7O14818 248 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 PPEF1O14829 653 aaPredicted RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 HGSO14964 777 aaPredicted RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 LYNP07948 512 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 UBTFL6P0CB48 400 aaPredicted RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 ITGA6P23229 1130 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 CDK7P50613 346 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 OXCT1P55809 520 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 RTP1P59025 263 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 HPCAP84074 193 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 PTPN12Q05209 780 aaKnown RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 MGAT5Q09328 741 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 TRIM32Q13049 653 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 ACVR2BQ13705 512 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 NAB2Q15742 525 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 DDB1Q16531 1140 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 ASTE1Q2TB18 679 aaPredicted RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 TCERG1LQ5VWI1 586 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 DENND2CQ68D51 928 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 DUS1LQ6P1R4 473 aaKnown RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 KLC3Q6P597 504 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 INTS8Q75QN2 995 aaKnown RBP6.89□□□□□ -1.31
CCNT1-202ENST00000417344 TAOK1Q7L7X3 1001 aa6.89□□□□□ -1.31
CCNT1-202ENST00000417344 CROCCP2Q86T23 111 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms