RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 RSRC1Q96IZ7 334 aaKnown RBP18.56■□□□□ 0.56
PHRF1-202ENST00000413872 BCL2L12Q9HB09 334 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 INPP5FQ9Y2H2 1132 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 ZBED1O96006 694 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 XKR3Q5GH77 459 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 KCTD17Q8N5Z5 321 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 TTC13Q8NBP0 860 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 KATNAL1Q9BW62 490 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 GPR75-ASB3A0A0A6YYF3 556 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 THOC5Q13769 683 aaKnown RBP18.56■□□□□ 0.56
PHRF1-202ENST00000413872 ANGEL2Q5VTE6 544 aaKnown RBP18.56■□□□□ 0.56
PHRF1-202ENST00000413872 FAM71BQ8TC56 605 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 ZNF560Q96MR9 790 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 NUF2Q9BZD4 464 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 PYCARDQ9ULZ3 195 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 KIDINS220Q9ULH0 1771 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 PSMD14O00487 310 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 ATP8B1O43520 1251 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 GCLMP48507 274 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 KCNH2Q12809 1159 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 XRRA1Q6P2D8 792 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 ACRBPQ8NEB7 543 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 RAET1EQ8TD07 263 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 LRRC8CQ8TDW0 803 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 ASNSD1Q9NWL6 643 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 GGA3Q9NZ52 723 aa18.56■□□□□ 0.56
PHRF1-202ENST00000413872 CCDC188H7C350 402 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 MOCS3O95396 460 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 COG7P83436 770 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 CCSER1Q9C0I3 900 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 NGRNQ9NPE2 291 aaKnown RBP18.55■□□□□ 0.56
PHRF1-202ENST00000413872 SOWAHDA6NJG2 315 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 CTNND1O60716 968 aaKnown RBP18.55■□□□□ 0.56
PHRF1-202ENST00000413872 FTCDO95954 541 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 PRCPP42785 496 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 IL9RQ01113 521 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 KCNB1Q14721 858 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 TRIM62Q9BVG3 475 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 SPTLC3Q9NUV7 552 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 MID2Q9UJV3 735 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 PFASO15067 1338 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 DGAT1O75907 488 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 DPEP1P16444 411 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 SAT1P21673 171 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 EPHB1P54762 984 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 BASP1P80723 227 aaKnown RBP18.55■□□□□ 0.56
PHRF1-202ENST00000413872 ZFYVE28Q9HCC9 887 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 MYOZ2Q9NPC6 264 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 TJP3O95049 919 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 GMPSP49915 693 aaPredicted RBP18.55■□□□□ 0.56
PHRF1-202ENST00000413872 IRX4P78413 519 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 TRIM72Q6ZMU5 477 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 RAPH1Q70E73 1250 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 GPD1LQ8N335 351 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.55■□□□□ 0.56
PHRF1-202ENST00000413872 STAP1Q9ULZ2 295 aa18.55■□□□□ 0.56
PHRF1-202ENST00000413872 MAFGO15525 162 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 DYNLT1P63172 113 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 GPATCH11Q8N954 259 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 KCND2Q9NZV8 630 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 ZNF609O15014 1411 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 POC1B-GALNT4F8VUJ3 575 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 ZNF18P17022 549 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 MSH2P43246 934 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 NXNQ6DKJ4 435 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 PHLDB2Q86SQ0 1253 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 ANGPTL3Q9Y5C1 460 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 A0A087WWV3 80 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 PPP4CP60510 307 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 TSNAXIP1Q2TAA8 658 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 OR6J1Q8NGC5 347 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 EPB41L5Q9HCM4 733 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 REREQ9P2R6 1566 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 GNGT1P63211 74 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 SMARCAD1Q9H4L7 1026 aa18.54■□□□□ 0.56
PHRF1-202ENST00000413872 CNOT8Q9UFF9 292 aaKnown RBP18.54■□□□□ 0.56
PHRF1-202ENST00000413872 GPC4O75487 556 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 CETPP11597 493 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 SNX1Q13596 522 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 HAUS6Q7Z4H7 955 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 ATP1A3P13637 1013 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 PLTPP55058 493 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 GPC5P78333 572 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 SLC10A5Q5PT55 438 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 STOX1Q6ZVD7 989 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 ANKRD13AQ8IZ07 590 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 PDIK1LQ8N165 341 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 CHST13Q8NET6 341 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 IGDCC4Q8TDY8 1250 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 SLITRK6Q9H5Y7 841 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 TLK1Q9UKI8 766 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 LRRC31Q6UY01 552 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 SEPT1Q8WYJ6 367 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 HDAC11Q96DB2 347 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 LMCD1Q9NZU5 365 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 MAGEB2O15479 319 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 RASA1P20936 1047 aa18.53■□□□□ 0.56
PHRF1-202ENST00000413872 BAATQ14032 418 aaPredicted RBP18.53■□□□□ 0.56
PHRF1-202ENST00000413872 MXD4Q14582 209 aaPredicted RBP18.53■□□□□ 0.56
PHRF1-202ENST00000413872 PDIA6Q15084 440 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms