RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 FOXP1Q9H334 677 aaPredicted RBP29.47■■■□□ 2.31
VEGFA-207ENST00000413642 MRPL42Q9Y6G3 142 aaKnown RBP29.47■■■□□ 2.31
VEGFA-207ENST00000413642 A0A087WWV3 80 aa29.46■■■□□ 2.31
VEGFA-207ENST00000413642 H3BNC9 293 aa29.46■■■□□ 2.31
VEGFA-207ENST00000413642 DKC1O60832 514 aaKnown RBP eCLIP29.46■■■□□ 2.31
VEGFA-207ENST00000413642 YWHABP31946 246 aaKnown RBP29.46■■■□□ 2.31
VEGFA-207ENST00000413642 SLC24A5Q71RS6 500 aa29.46■■■□□ 2.31
VEGFA-207ENST00000413642 ZSWIM4Q9H7M6 989 aa29.46■■■□□ 2.31
VEGFA-207ENST00000413642 LMCD1Q9NZU5 365 aa29.46■■■□□ 2.31
VEGFA-207ENST00000413642 PCDHB7Q9Y5E2 793 aa29.46■■■□□ 2.31
VEGFA-207ENST00000413642 WDR81Q562E7 1941 aa29.45■■■□□ 2.31
VEGFA-207ENST00000413642 PRRC2BQ5JSZ5 2229 aaKnown RBP29.45■■■□□ 2.31
VEGFA-207ENST00000413642 A0A087WZ62 844 aa29.45■■■□□ 2.31
VEGFA-207ENST00000413642 BMPR1AP36894 532 aa29.45■■■□□ 2.31
VEGFA-207ENST00000413642 DNM2P50570 870 aa29.45■■■□□ 2.31
VEGFA-207ENST00000413642 FAM102BQ5T8I3 360 aa29.45■■■□□ 2.31
VEGFA-207ENST00000413642 RHPN2Q8IUC4 686 aa29.45■■■□□ 2.31
VEGFA-207ENST00000413642 HSD17B14Q9BPX1 270 aa29.45■■■□□ 2.31
VEGFA-207ENST00000413642 FDXACB1Q9BRP7 624 aaPredicted RBP29.45■■■□□ 2.31
VEGFA-207ENST00000413642 C1orf112Q9NSG2 853 aa29.45■■■□□ 2.31
VEGFA-207ENST00000413642 TTC3P53804 2025 aa29.45■■■□□ 2.3
VEGFA-207ENST00000413642 LOXHD1Q8IVV2 1947 aa29.44■■■□□ 2.3
VEGFA-207ENST00000413642 POTEMA6NI47 508 aa29.44■■■□□ 2.3
VEGFA-207ENST00000413642 FAM189BP81408 668 aa29.44■■■□□ 2.3
VEGFA-207ENST00000413642 TFF2Q03403 129 aa29.44■■■□□ 2.3
VEGFA-207ENST00000413642 NBR1Q14596 966 aa29.44■■■□□ 2.3
VEGFA-207ENST00000413642 XKR9Q5GH70 373 aa29.44■■■□□ 2.3
VEGFA-207ENST00000413642 NOSTRINQ8IVI9 506 aa29.44■■■□□ 2.3
VEGFA-207ENST00000413642 CMTR2Q8IYT2 770 aaKnown RBP29.44■■■□□ 2.3
VEGFA-207ENST00000413642 TMEM143Q96AN5 459 aa29.44■■■□□ 2.3
VEGFA-207ENST00000413642 GNL2Q13823 731 aaKnown RBP29.43■■■□□ 2.3
VEGFA-207ENST00000413642 ZNF710Q8N1W2 664 aa29.43■■■□□ 2.3
VEGFA-207ENST00000413642 CLP1Q92989 425 aaKnown RBP29.43■■■□□ 2.3
VEGFA-207ENST00000413642 GCOM2Q9BZD3 368 aaPredicted RBP29.43■■■□□ 2.3
VEGFA-207ENST00000413642 DHX33Q9H6R0 707 aaKnown RBP29.43■■■□□ 2.3
VEGFA-207ENST00000413642 PRUNE2Q8WUY3 3088 aa29.43■■■□□ 2.3
VEGFA-207ENST00000413642 FGFR1P11362 822 aa29.42■■■□□ 2.3
VEGFA-207ENST00000413642 POLGP54098 1239 aaPredicted RBP29.42■■■□□ 2.3
VEGFA-207ENST00000413642 TTC38Q5R3I4 469 aa29.42■■■□□ 2.3
VEGFA-207ENST00000413642 ATXN2LQ8WWM7 1075 aaKnown RBP29.42■■■□□ 2.3
VEGFA-207ENST00000413642 SLC7A3Q8WY07 619 aa29.42■■■□□ 2.3
VEGFA-207ENST00000413642 NLRP4Q96MN2 994 aa29.42■■■□□ 2.3
VEGFA-207ENST00000413642 ASB2Q96Q27 587 aa29.42■■■□□ 2.3
VEGFA-207ENST00000413642 C5orf67F2Z3F1 127 aa29.41■■■□□ 2.3
VEGFA-207ENST00000413642 GRM6O15303 877 aa29.41■■■□□ 2.3
VEGFA-207ENST00000413642 TJAP1Q5JTD0 557 aa29.41■■■□□ 2.3
VEGFA-207ENST00000413642 OTUD6AQ7L8S5 288 aa29.41■■■□□ 2.3
VEGFA-207ENST00000413642 MRPL38Q96DV4 380 aaKnown RBP29.41■■■□□ 2.3
VEGFA-207ENST00000413642 JPH2Q9BR39 696 aaPredicted RBP29.41■■■□□ 2.3
VEGFA-207ENST00000413642 HCSTQ9UBK5 93 aa29.41■■■□□ 2.3
VEGFA-207ENST00000413642 TBKBP1A7MCY6 615 aa29.4■■■□□ 2.3
VEGFA-207ENST00000413642 ZSCAN20P17040 1043 aaPredicted RBP29.4■■■□□ 2.3
VEGFA-207ENST00000413642 RFC5P40937 340 aa29.4■■■□□ 2.3
VEGFA-207ENST00000413642 MRPS5P82675 430 aaKnown RBP29.4■■■□□ 2.3
VEGFA-207ENST00000413642 EMC2Q15006 297 aa29.4■■■□□ 2.3
VEGFA-207ENST00000413642 PRPF31Q8WWY3 499 aaKnown RBP29.4■■■□□ 2.3
VEGFA-207ENST00000413642 ATP6V0A4Q9HBG4 840 aa29.4■■■□□ 2.3
VEGFA-207ENST00000413642 TMEM161AQ9NX61 479 aa29.4■■■□□ 2.3
VEGFA-207ENST00000413642 CSPG5O95196 566 aa29.39■■■□□ 2.3
VEGFA-207ENST00000413642 LYPLA2O95372 231 aa29.39■■■□□ 2.3
VEGFA-207ENST00000413642 RB1P06400 928 aa29.39■■■□□ 2.3
VEGFA-207ENST00000413642 OR52Z1P0C646 297 aa29.39■■■□□ 2.3
VEGFA-207ENST00000413642 U2AF2P26368 475 aaKnown RBP eCLIP29.39■■■□□ 2.32e-48■□□□□ 11.2
VEGFA-207ENST00000413642 TECP42680 631 aa29.39■■■□□ 2.3
VEGFA-207ENST00000413642 TOB1P50616 345 aaPredicted RBP29.39■■■□□ 2.3
VEGFA-207ENST00000413642 CDC42EP1Q00587 391 aa29.39■■■□□ 2.3
VEGFA-207ENST00000413642 FAM43BQ6ZT52 329 aaPredicted RBP29.39■■■□□ 2.3
VEGFA-207ENST00000413642 ZNF410Q86VK4 478 aa29.39■■■□□ 2.3
VEGFA-207ENST00000413642 XPNPEP1Q9NQW7 623 aa29.39■■■□□ 2.3
VEGFA-207ENST00000413642 RNF19AQ9NV58 838 aa29.39■■■□□ 2.3
VEGFA-207ENST00000413642 COL4A3BPQ9Y5P4 624 aa29.39■■■□□ 2.3
VEGFA-207ENST00000413642 UNC80Q8N2C7 3258 aa29.38■■■□□ 2.29
VEGFA-207ENST00000413642 SPATA31C1P0DKV0 1188 aa29.38■■■□□ 2.29
VEGFA-207ENST00000413642 PTPROQ16827 1216 aa29.38■■■□□ 2.29
VEGFA-207ENST00000413642 ECHDC2Q86YB7 292 aa29.38■■■□□ 2.29
VEGFA-207ENST00000413642 C4orf32Q8N8J7 132 aa29.38■■■□□ 2.29
VEGFA-207ENST00000413642 PIGOQ8TEQ8 1089 aa29.38■■■□□ 2.29
VEGFA-207ENST00000413642 C11orf84Q9BUA3 381 aaPredicted RBP29.38■■■□□ 2.29
VEGFA-207ENST00000413642 IFT122Q9HBG6 1241 aa29.38■■■□□ 2.29
VEGFA-207ENST00000413642 ALG13Q9NP73 1137 aaKnown RBP29.38■■■□□ 2.29
VEGFA-207ENST00000413642 RWDD3Q9Y3V2 267 aa29.38■■■□□ 2.29
VEGFA-207ENST00000413642 PPME1Q9Y570 386 aa29.38■■■□□ 2.29
VEGFA-207ENST00000413642 MED24O75448 989 aa29.37■■■□□ 2.29
VEGFA-207ENST00000413642 SRGAP2CP0DJJ0 459 aa29.37■■■□□ 2.29
VEGFA-207ENST00000413642 KCNQ1P51787 676 aa29.37■■■□□ 2.29
VEGFA-207ENST00000413642 RNF169Q8NCN4 708 aa29.37■■■□□ 2.29
VEGFA-207ENST00000413642 NEK9Q8TD19 979 aa29.37■■■□□ 2.29
VEGFA-207ENST00000413642 ELAC1Q9H777 363 aaKnown RBP29.37■■■□□ 2.29
VEGFA-207ENST00000413642 TRANK1O15050 2925 aa29.36■■■□□ 2.29
VEGFA-207ENST00000413642 GJB2P29033 226 aa29.36■■■□□ 2.29
VEGFA-207ENST00000413642 LAMTOR4Q0VGL1 99 aa29.36■■■□□ 2.29
VEGFA-207ENST00000413642 CATSPER3Q86XQ3 398 aa29.36■■■□□ 2.29
VEGFA-207ENST00000413642 PSPC1Q8WXF1 523 aaKnown RBP29.36■■■□□ 2.29
VEGFA-207ENST00000413642 HLA-CQ95604 372 aa29.36■■■□□ 2.29
VEGFA-207ENST00000413642 ANKEF1Q9NU02 776 aa29.36■■■□□ 2.29
VEGFA-207ENST00000413642 NOL7Q9UMY1 257 aaKnown RBP29.36■■■□□ 2.29
VEGFA-207ENST00000413642 PLAGL2Q9UPG8 496 aa29.36■■■□□ 2.29
VEGFA-207ENST00000413642 PCDHB6Q9Y5E3 794 aa29.36■■■□□ 2.29
VEGFA-207ENST00000413642 TRAPPC10P48553 1259 aa29.35■■■□□ 2.29
VEGFA-207ENST00000413642 TCEAL5Q5H9L2 206 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms