RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 PHTF1Q9UMS5 762 aa6.95□□□□□ -1.3
NOD1-203ENST00000413433 PCDHGA9Q9Y5G4 932 aaKnown RBP6.95□□□□□ -1.3
NOD1-203ENST00000413433 PCDHGA8Q9Y5G5 932 aa6.95□□□□□ -1.3
NOD1-203ENST00000413433 PCDHGA7Q9Y5G6 932 aa6.95□□□□□ -1.3
NOD1-203ENST00000413433 PCDHGA6Q9Y5G7 932 aa6.95□□□□□ -1.3
NOD1-203ENST00000413433 PCDHGA3Q9Y5H0 932 aa6.95□□□□□ -1.3
NOD1-203ENST00000413433 PCDHGA2Q9Y5H1 932 aa6.95□□□□□ -1.3
NOD1-203ENST00000413433 SPO11Q9Y5K1 396 aa6.95□□□□□ -1.3
NOD1-203ENST00000413433 QRICH2Q9H0J4 1663 aa6.95□□□□□ -1.3
NOD1-203ENST00000413433 PARP4Q9UKK3 1724 aaKnown RBP6.95□□□□□ -1.3
NOD1-203ENST00000413433 KIAA1210Q9ULL0 1709 aa6.95□□□□□ -1.3
NOD1-203ENST00000413433 F8W735 103 aaPredicted RBP6.94□□□□□ -1.3
NOD1-203ENST00000413433 ARNTLO00327 626 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 TBX3O15119 743 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 DYNC1LI2O43237 492 aaPredicted RBP6.94□□□□□ -1.3
NOD1-203ENST00000413433 FGAP02671 866 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 MYL3P08590 195 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 VAV1P15498 845 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 GLB1P16278 677 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 KRT15P19012 456 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 SLC9A1P19634 815 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 AKAP5P24588 427 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 SSTR4P31391 388 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 TRAPPC10P48553 1259 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 GTF2A2P52657 109 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 GJA9P57773 515 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 PHC1P78364 1004 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 LSAMPQ13449 338 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 GPR162Q16538 588 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 C1orf228Q6PIY5 440 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 PRR23CQ6ZRP0 262 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 CMIPQ8IY22 773 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 IFNL2Q8IZJ0 200 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 USHBP1Q8N6Y0 703 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 KIAA1958Q8N8K9 716 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 ANKRD42Q8N9B4 389 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 SLC35G2Q8TBE7 412 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 PARD3BQ8TEW8 1205 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 IP6K1Q92551 441 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 TCTN2Q96GX1 697 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 NLRC4Q9NPP4 1024 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 DDX21Q9NR30 783 aaKnown RBP eCLIP6.94□□□□□ -1.3
NOD1-203ENST00000413433 CCM2LQ9NUG4 571 aaPredicted RBP6.94□□□□□ -1.3
NOD1-203ENST00000413433 TFCP2L1Q9NZI6 479 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 PPARGC1AQ9UBK2 798 aaKnown RBP6.94□□□□□ -1.3
NOD1-203ENST00000413433 RNF114Q9Y508 228 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 COL18A1P39060 1754 aa6.94□□□□□ -1.3
NOD1-203ENST00000413433 BCL9O00512 1426 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 NFAT5O94916 1531 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 ST20-MTHFSA0A0A6YYL1 179 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 KDM1AO60341 852 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 GNAT1P11488 350 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 PDE6AP16499 860 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 TAL1P17542 331 aaPredicted RBP6.93□□□□□ -1.3
NOD1-203ENST00000413433 CD53P19397 219 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 SERPINB3P29508 390 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 IREB2P48200 963 aaKnown RBP6.93□□□□□ -1.3
NOD1-203ENST00000413433 AMPHP49418 695 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 PPM1FP49593 454 aaPredicted RBP6.93□□□□□ -1.3
NOD1-203ENST00000413433 PCBP3P57721 371 aaKnown RBP6.93□□□□□ -1.3
NOD1-203ENST00000413433 ZNF280AP59817 542 aaPredicted RBP6.93□□□□□ -1.3
NOD1-203ENST00000413433 RPL11P62913 178 aaKnown RBP6.93□□□□□ -1.3
NOD1-203ENST00000413433 LACTBP83111 547 aaPredicted RBP6.93□□□□□ -1.3
NOD1-203ENST00000413433 CHAF1AQ13111 956 aaPredicted RBP6.93□□□□□ -1.3
NOD1-203ENST00000413433 STK3Q13188 491 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 LAPTM5Q13571 262 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 RRS1Q15050 365 aaKnown RBP6.93□□□□□ -1.3
NOD1-203ENST00000413433 INF2Q27J81 1249 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 ERAP2Q6P179 960 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 TOGARAM2Q6ZUX3 1019 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 FAM186BQ8IYM0 893 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 TMEM130Q8N3G9 435 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 NAT16Q8N8M0 369 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 ZNF610Q8N9Z0 462 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 ACRBPQ8NEB7 543 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 PIWIL2Q8TC59 973 aaKnown RBP6.93□□□□□ -1.3
NOD1-203ENST00000413433 LMBR1Q8WVP7 490 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 TAAR9Q96RI9 348 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 DUSP23Q9BVJ7 150 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 AKTIPQ9H8T0 292 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 CLDND1Q9NY35 253 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
NOD1-203ENST00000413433 CD163L1Q9NR16 1453 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 UTRNP46939 3433 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 ZRANB2O95218 330 aaKnown RBP eCLIP6.92□□□□□ -1.3
NOD1-203ENST00000413433 SYPP08247 313 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 NOS3P29474 1203 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 GPR3P46089 330 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 KIF11P52732 1056 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 AK2P54819 239 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 TMEM95Q3KNT9 176 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 SGO2Q562F6 1265 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 FRMD7Q6ZUT3 714 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 SMIM5Q71RC9 77 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 SRGAP1Q7Z6B7 1085 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 SRLQ86TD4 932 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 CPNE8Q86YQ8 564 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 CPXCR1Q8N123 301 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 MFSD4AQ8N468 514 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 NLGN2Q8NFZ4 835 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms