RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 ANKEF1Q9NU02 776 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 DNAJB2P25686 324 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 DNM2P50570 870 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 CRYBB1P53674 252 aaPredicted RBP13.35□□□□□ -0.27
NEDD1-202ENST00000411739 FAM228AQ86W67 206 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 LINC01599Q8WXQ3 324 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 NKX2-4Q9H2Z4 354 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 ZSCAN16Q9H4T2 348 aaPredicted RBP13.35□□□□□ -0.27
NEDD1-202ENST00000411739 ST3GAL5Q9UNP4 418 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 BAIAP3O94812 1187 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 SMAD3P84022 425 aaKnown RBP13.34□□□□□ -0.27
NEDD1-202ENST00000411739 HAUS3Q68CZ6 603 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 USP49Q70CQ1 688 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 HERC6Q8IVU3 1022 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 PNMA5Q96PV4 448 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 MTRQ99707 1265 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 ZBED2Q9BTP6 218 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 BHMT2Q9H2M3 363 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 KDM3AQ9Y4C1 1321 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 ENPP3O14638 875 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 MGEA5O60502 916 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 ARHGEF15O94989 841 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 F13A1P00488 732 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 RFC5P40937 340 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 ARL6IP4Q66PJ3 421 aaKnown RBP13.34□□□□□ -0.27
NEDD1-202ENST00000411739 SPRED2Q7Z698 418 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 ZDHHC9Q9Y397 364 aa13.34□□□□□ -0.27
NEDD1-202ENST00000411739 LCHNA4D1U4 455 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 ARHGEF35A5YM69 484 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 RPLP2P05387 115 aaKnown RBP13.33□□□□□ -0.28
NEDD1-202ENST00000411739 LAMTOR4Q0VGL1 99 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 BECN1Q14457 450 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 PADI6Q6TGC4 694 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 DEFB123Q8N688 67 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 ASAP3Q8TDY4 903 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 CSRNP2Q9H175 543 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 TTYH1Q9H313 450 aaPredicted RBP13.33□□□□□ -0.28
NEDD1-202ENST00000411739 CERS4Q9HA82 394 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 ATP6V0A4Q9HBG4 840 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 ERVK-5Q9HDB9 667 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 COL4A3BPQ9Y5P4 624 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 PTPRSQ13332 1948 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 EIF4BP23588 611 aaKnown RBP13.33□□□□□ -0.28
NEDD1-202ENST00000411739 GRB10Q13322 594 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 FAM102BQ5T8I3 360 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 CABP7Q86V35 215 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 LRRC15Q8TF66 581 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 APBB2Q92870 758 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 TIFAQ96CG3 184 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 EPSTI1Q96J88 318 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 SLC9A7Q96T83 725 aa13.33□□□□□ -0.28
NEDD1-202ENST00000411739 FBXO2Q9UK22 296 aaPredicted RBP13.33□□□□□ -0.28
NEDD1-202ENST00000411739 TLL1O43897 1013 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 DGAT1O75907 488 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 AMHP03971 560 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 SSBP05455 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
NEDD1-202ENST00000411739 CA3P07451 260 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 XRCC6P12956 609 aaKnown RBP eCLIP13.32□□□□□ -0.28
NEDD1-202ENST00000411739 DARSP14868 501 aaKnown RBP13.32□□□□□ -0.28
NEDD1-202ENST00000411739 RAD51AP2Q09MP3 1159 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 KARSQ15046 597 aaKnown RBP13.32□□□□□ -0.28
NEDD1-202ENST00000411739 RNF149Q8NC42 400 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 PSPC1Q8WXF1 523 aaKnown RBP13.32□□□□□ -0.28
NEDD1-202ENST00000411739 JPH2Q9BR39 696 aaPredicted RBP13.32□□□□□ -0.28
NEDD1-202ENST00000411739 POLR3FQ9H1D9 316 aaPredicted RBP13.32□□□□□ -0.28
NEDD1-202ENST00000411739 MINDY3Q9H8M7 445 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 MSRAQ9UJ68 235 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 DBR1Q9UK59 544 aaKnown RBP13.32□□□□□ -0.28
NEDD1-202ENST00000411739 DHX8Q14562 1220 aaKnown RBP13.32□□□□□ -0.28
NEDD1-202ENST00000411739 STK38Q15208 465 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 ADAM2Q99965 735 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 PANK2Q9BZ23 570 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 GCOM2Q9BZD3 368 aaPredicted RBP13.32□□□□□ -0.28
NEDD1-202ENST00000411739 IFT122Q9HBG6 1241 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 DNM3Q9UQ16 869 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 ARID2Q68CP9 1835 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 GBF1Q92538 1859 aa13.32□□□□□ -0.28
NEDD1-202ENST00000411739 MICAL3Q7RTP6 2002 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 BMP15O95972 392 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 GLRA2P23416 452 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 UBA7P41226 1012 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 DNM1Q05193 864 aaKnown RBP13.31□□□□□ -0.28
NEDD1-202ENST00000411739 SLC39A14Q15043 492 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 USP38Q8NB14 1042 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 PHOSPHO2Q8TCD6 241 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 CDK5RAP3Q96JB5 506 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 SQORQ9Y6N5 450 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 GPR182O15218 404 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 GJB5O95377 273 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 ARL2P36404 184 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 GATMP50440 423 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 ZNF697Q5TEC3 545 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 RASSF8Q8NHQ8 419 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 TCP11Q8WWU5 503 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 ZNF396Q96N95 335 aaPredicted RBP13.31□□□□□ -0.28
NEDD1-202ENST00000411739 RUSC1Q9BVN2 902 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 SEMA6BQ9H3T3 888 aa13.31□□□□□ -0.28
NEDD1-202ENST00000411739 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 EFCAB14O75071 495 aa13.3□□□□□ -0.28
NEDD1-202ENST00000411739 CAPSQ13938 189 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms