RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 ANKRD7Q92527 254 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 KLRG1Q96E93 195 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 DYDC2Q96IM9 177 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 TIPINQ9BVW5 301 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 HAUS4Q9H6D7 363 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 PARVGQ9HBI0 331 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 METTL14Q9HCE5 456 aaKnown RBP8.25□□□□□ -1.09
CXCR4-202ENST00000409817 RAVER2Q9HCJ3 691 aaKnown RBP8.25□□□□□ -1.09
CXCR4-202ENST00000409817 KCNH7Q9NS40 1196 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 TYW1Q9NV66 732 aaKnown RBP8.25□□□□□ -1.09
CXCR4-202ENST00000409817 PLAGL2Q9UPG8 496 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 SIK3Q9Y2K2 1263 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 PARP14Q460N5 1801 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 SFI1A8K8P3 1242 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 STAM2O75886 525 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 FAM13AO94988 1023 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 ARP10275 920 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 MAPTP10636 758 aaKnown RBP8.24□□□□□ -1.09
CXCR4-202ENST00000409817 ITGB5P18084 799 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 SFNP31947 248 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 SCTRP47872 440 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 JAK3P52333 1124 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 ZNF131P52739 623 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 RPS6P62753 249 aaKnown RBP8.24□□□□□ -1.09
CXCR4-202ENST00000409817 TUBB4BP68371 445 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 ADAM9Q13443 819 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 ALCAMQ13740 583 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 COG2Q14746 738 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 MTF1Q14872 753 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 RNF207Q6ZRF8 634 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 MIER3Q7Z3K6 550 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 SFR1Q86XK3 245 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 CPXCR1Q8N123 301 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 TXLNBQ8N3L3 684 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 GOLGA5Q8TBA6 731 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 SYN2Q92777 582 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-202ENST00000409817 TRERF1Q96PN7 1200 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 DESI2Q9BSY9 194 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 UNC45AQ9H3U1 944 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 ZHX3Q9H4I2 956 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 ZSWIM4Q9H7M6 989 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 MRPL44Q9H9J2 332 aaKnown RBP8.24□□□□□ -1.09
CXCR4-202ENST00000409817 AGO4Q9HCK5 861 aaKnown RBP8.24□□□□□ -1.09
CXCR4-202ENST00000409817 HOXC10Q9NYD6 342 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 RGL1Q9NZL6 768 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 TMOD4Q9NZQ9 345 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 TCEAL9Q9UHQ7 104 aa8.24□□□□□ -1.09
CXCR4-202ENST00000409817 DBR1Q9UK59 544 aaKnown RBP8.24□□□□□ -1.09
CXCR4-202ENST00000409817 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.24□□□□□ -1.09
CXCR4-202ENST00000409817 ASTN2O75129 1339 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-202ENST00000409817 NPHP3-ACAD11A0A0J9YXS1 232 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 EIF3CLB5ME19 914 aaKnown RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 RNF225M0QZC1 329 aaPredicted RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 CHMP2AO43633 222 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 NR2F2P24468 414 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 SERPINB4P48594 390 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 SEC13P55735 322 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 KRT76Q01546 638 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 MTMR1Q13613 665 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 CTTNQ14247 550 aaKnown RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 PGM5Q15124 567 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 WDR59Q6PJI9 974 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 ANKLE1Q8NAG6 615 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 SLC17A8Q8NDX2 589 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 GLIS3Q8NEA6 775 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 NEK11Q8NG66 645 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 TRPM4Q8TD43 1214 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 GPRASP2Q96D09 838 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 CDHR1Q96JP9 859 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 UIMC1Q96RL1 719 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 KCTD15Q96SI1 283 aaPredicted RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 EIF3CQ99613 913 aaKnown RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 PDCD2LQ9BRP1 358 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 LXNQ9BS40 222 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 MKNK1Q9BUB5 465 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 RUSC1Q9BVN2 902 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 PDCL3Q9H2J4 239 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 GGA3Q9NZ52 723 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 TBC1D7Q9P0N9 293 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 COL20A1Q9P218 1284 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 ZNF215Q9UL58 517 aaPredicted RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 ZHX2Q9Y6X8 837 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 PHIPQ8WWQ0 1821 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 ARHGEF35A5YM69 484 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 RASSF10A6NK89 507 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 DHX15O43143 795 aaKnown RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 KRT86O43790 486 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 PPP1R12BO60237 982 aaPredicted RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 DKC1O60832 514 aaKnown RBP eCLIP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 CCND2P30279 289 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 EPS15P42566 896 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 UBXN2AP68543 259 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 KCNC4Q03721 635 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 NCBP1Q09161 790 aaKnown RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 RAD51AP2Q09MP3 1159 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 MYBPC2Q14324 1141 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 MUM1L1Q5H9M0 696 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 INTS6LQ5JSJ4 861 aaKnown RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 CATSPERGQ6ZRH7 1159 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 NLRX1Q86UT6 975 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms