RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 RAB3IL1Q8TBN0 382 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 FBF1Q8TES7 1133 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ZNF483Q8TF39 744 aaPredicted RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 FAM81BQ96LP2 452 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 FBXO40Q9UH90 709 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 NPHP3-ACAD11A0A0J9YXS1 232 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 WDR64B1ANS9 1081 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 KRT1P04264 644 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 MAPK4P31152 587 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 EIF4A3P38919 411 aaKnown RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 ANTXR2P58335 489 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 BFSP1Q12934 665 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 MYO1EQ12965 1108 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 BRD3Q15059 726 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 GEN1Q17RS7 908 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 HHATQ5VTY9 493 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 PALM2Q8IXS6 379 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 IGDCC4Q8TDY8 1250 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 NSUN6Q8TEA1 469 aaKnown RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 CCT6BQ92526 530 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 PANX2Q96RD6 677 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 LXNQ9BS40 222 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 ZCWPW1Q9H0M4 648 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 POLR3FQ9H1D9 316 aaPredicted RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 NDST4Q9H3R1 872 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 ACAD9Q9H845 621 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 TBC1D22BQ9NU19 505 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 GEMIN8Q9NWZ8 242 aaKnown RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 TACC3Q9Y6A5 838 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 TAF1P21675 1872 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 ATP8B3O60423 1300 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 EBAG9O00559 213 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 ARHGAP33O14559 1287 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 MAP2K7O14733 419 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 SLC16A4O15374 487 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 MFAP3LO75121 409 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 OATP04181 439 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 ATP1A3P13637 1013 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 GM2AP17900 193 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 TCP1P17987 556 aaKnown RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 PHBP35232 272 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 CCNHP51946 323 aaPredicted RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 SPP2Q13103 211 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 ARHGEF6Q15052 776 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 CCDC6Q16204 474 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 MAP7D1Q3KQU3 841 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 NAA35Q5VZE5 725 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 DUS1LQ6P1R4 473 aaKnown RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 HHIPL2Q6UWX4 724 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 RUFY4Q6ZNE9 571 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 TOGARAM2Q6ZUX3 1019 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 CROCCP2Q86T23 111 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 ABI1Q8IZP0 508 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 GABPB2Q8TAK5 448 aaPredicted RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 MGARPQ8TDB4 240 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 LRRC15Q8TF66 581 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 FAM167AQ96KS9 214 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 RUNDC3BQ96NL0 473 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 TUT1Q9H6E5 874 aaKnown RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 MTMR4Q9NYA4 1195 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 NXF1Q9UBU9 619 aaKnown RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 C4AP0C0L4 1744 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 C4BP0C0L5 1744 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 FTCDO95954 541 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 NR3C1P04150 777 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 KRT15P19012 456 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 PRCPP42785 496 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 PSMC4P43686 418 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 MXI1P50539 228 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 HMGCS2P54868 508 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 ATP2C1P98194 919 aaPredicted RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 KRT76Q01546 638 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 SLFN12LQ6IEE8 588 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 SHC4Q6S5L8 630 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 CLEC10AQ8IUN9 316 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 CCDC13Q8IYE1 715 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 PPM1EQ8WY54 764 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 HAUS1Q96CS2 278 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 HEXIM2Q96MH2 286 aaKnown RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 EIF2AK1Q9BQI3 630 aaKnown RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 FAM49AQ9H0Q0 323 aaPredicted RBP4.09□□□□□ -1.75
RGPD4-201ENST00000408999 RABEP2Q9H5N1 569 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 SENP2Q9HC62 589 aa4.09□□□□□ -1.75
RGPD4-201ENST00000408999 PASKQ96RG2 1323 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 GOLGA8KD6RF30 607 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 I3L4J1 428 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 SGK1O00141 431 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 MYO1CO00159 1063 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 IFNB1P01574 187 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 SFNP31947 248 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 VPS41P49754 854 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 RNASELQ05823 741 aaKnown RBP4.09□□□□□ -1.76
RGPD4-201ENST00000408999 SURF1Q15526 300 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 ERCC6LQ2NKX8 1250 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 SWSAP1Q6NVH7 229 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 CAPN12Q6ZSI9 719 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 PDZD4Q76G19 769 aaPredicted RBP4.09□□□□□ -1.76
RGPD4-201ENST00000408999 LDHDQ86WU2 507 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 CCDC110Q8TBZ0 833 aa4.09□□□□□ -1.76
RGPD4-201ENST00000408999 P3H4Q92791 437 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms