RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 DIS3Q9Y2L1 958 aaKnown RBP28.16■■■□□ 2.1
CPNE1-205ENST00000401607 SLC16A4O15374 487 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 OFD1O75665 1012 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 TTLL4Q14679 1199 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 TAPT1Q6NXT6 567 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 HS2ST1Q7LGA3 356 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 SCFD2Q8WU76 684 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 NUP58Q9BVL2 599 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 DMAC2Q9NW81 257 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.16■■■□□ 2.1
CPNE1-205ENST00000401607 KRT9P35527 623 aa28.15■■■□□ 2.1
CPNE1-205ENST00000401607 NPTX2P47972 431 aa28.15■■■□□ 2.1
CPNE1-205ENST00000401607 DHX37Q8IY37 1157 aaKnown RBP28.15■■■□□ 2.1
CPNE1-205ENST00000401607 CCDC155Q8N6L0 562 aa28.15■■■□□ 2.1
CPNE1-205ENST00000401607 RETREG2Q8NC44 543 aa28.15■■■□□ 2.1
CPNE1-205ENST00000401607 KATNBL1Q9H079 304 aa28.15■■■□□ 2.1
CPNE1-205ENST00000401607 TMEM206Q9H813 350 aa28.15■■■□□ 2.1
CPNE1-205ENST00000401607 C17orf75Q9HAS0 396 aa28.15■■■□□ 2.1
CPNE1-205ENST00000401607 FAM184BQ9ULE4 1060 aa28.15■■■□□ 2.1
CPNE1-205ENST00000401607 ZNF236Q9UL36 1845 aa28.15■■■□□ 2.1
CPNE1-205ENST00000401607 LGR5O75473 907 aa28.14■■■□□ 2.1
CPNE1-205ENST00000401607 RTP1P59025 263 aa28.14■■■□□ 2.1
CPNE1-205ENST00000401607 DMP1Q13316 513 aaPredicted RBP28.14■■■□□ 2.1
CPNE1-205ENST00000401607 FIGNQ5HY92 759 aa28.14■■■□□ 2.1
CPNE1-205ENST00000401607 MAMDC4Q6UXC1 1216 aa28.14■■■□□ 2.1
CPNE1-205ENST00000401607 SYCP3Q8IZU3 236 aa28.14■■■□□ 2.1
CPNE1-205ENST00000401607 SLC17A8Q8NDX2 589 aa28.14■■■□□ 2.1
CPNE1-205ENST00000401607 GOLGA5Q8TBA6 731 aa28.14■■■□□ 2.1
CPNE1-205ENST00000401607 SPIRE2Q8WWL2 714 aa28.14■■■□□ 2.1
CPNE1-205ENST00000401607 ACCSQ96QU6 501 aa28.14■■■□□ 2.1
CPNE1-205ENST00000401607 VTA1Q9NP79 307 aa28.14■■■□□ 2.1
CPNE1-205ENST00000401607 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.14■■■□□ 2.1
CPNE1-205ENST00000401607 ARMCX3Q9UH62 379 aaPredicted RBP28.14■■■□□ 2.1
CPNE1-205ENST00000401607 EMC2Q15006 297 aa28.14■■■□□ 2.09
CPNE1-205ENST00000401607 DPP9Q86TI2 863 aa28.14■■■□□ 2.09
CPNE1-205ENST00000401607 TMEM161BQ8NDZ6 487 aa28.14■■■□□ 2.09
CPNE1-205ENST00000401607 BORCS6Q96GS4 357 aa28.14■■■□□ 2.09
CPNE1-205ENST00000401607 PCMTD1Q96MG8 357 aaPredicted RBP28.14■■■□□ 2.09
CPNE1-205ENST00000401607 SPATA33Q96N06 139 aa28.14■■■□□ 2.09
CPNE1-205ENST00000401607 NTPCRQ9BSD7 190 aaKnown RBP28.14■■■□□ 2.09
CPNE1-205ENST00000401607 NAA15Q9BXJ9 866 aaKnown RBP28.14■■■□□ 2.09
CPNE1-205ENST00000401607 DHX33Q9H6R0 707 aaKnown RBP28.14■■■□□ 2.09
CPNE1-205ENST00000401607 TRMT1Q9NXH9 659 aaKnown RBP28.14■■■□□ 2.09
CPNE1-205ENST00000401607 EPB41P11171 864 aaKnown RBP28.13■■■□□ 2.09
CPNE1-205ENST00000401607 TRIM21P19474 475 aaKnown RBP28.13■■■□□ 2.09
CPNE1-205ENST00000401607 KCNMA1Q12791 1236 aa28.13■■■□□ 2.09
CPNE1-205ENST00000401607 TAF1CQ15572 869 aaPredicted RBP28.13■■■□□ 2.09
CPNE1-205ENST00000401607 TARBP2Q15633 366 aaKnown RBP28.13■■■□□ 2.09
CPNE1-205ENST00000401607 MAML3Q96JK9 1138 aa28.13■■■□□ 2.09
CPNE1-205ENST00000401607 KIFC3Q9BVG8 833 aa28.13■■■□□ 2.09
CPNE1-205ENST00000401607 TLL2Q9Y6L7 1015 aa28.13■■■□□ 2.09
CPNE1-205ENST00000401607 RBM47A0AV96 593 aaKnown RBP28.12■■■□□ 2.09
CPNE1-205ENST00000401607 CCDC169A6NNP5 214 aa28.12■■■□□ 2.09
CPNE1-205ENST00000401607 FAM155AB1AL88 458 aaPredicted RBP28.12■■■□□ 2.09
CPNE1-205ENST00000401607 NOP56O00567 594 aaKnown RBP28.12■■■□□ 2.09
CPNE1-205ENST00000401607 SNAI1O95863 264 aaPredicted RBP28.12■■■□□ 2.09
CPNE1-205ENST00000401607 POLGP54098 1239 aaPredicted RBP28.12■■■□□ 2.09
CPNE1-205ENST00000401607 SLC9A9Q8IVB4 645 aa28.12■■■□□ 2.09
CPNE1-205ENST00000401607 POLR3FQ9H1D9 316 aaPredicted RBP28.12■■■□□ 2.09
CPNE1-205ENST00000401607 METTL14Q9HCE5 456 aaKnown RBP28.12■■■□□ 2.09
CPNE1-205ENST00000401607 NRBP2Q9NSY0 501 aa28.12■■■□□ 2.09
CPNE1-205ENST00000401607 AGPAT5Q9NUQ2 364 aa28.12■■■□□ 2.09
CPNE1-205ENST00000401607 LUC7L2Q9Y383 392 aaKnown RBP28.12■■■□□ 2.09
CPNE1-205ENST00000401607 SMTNP53814 917 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 TRIM50Q86XT4 487 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 IFNL1Q8IU54 200 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 DNAJC7Q99615 494 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 MKNK1Q9BUB5 465 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 AZI2Q9H6S1 392 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 KMT5AQ9NQR1 393 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 EMSYQ7Z589 1322 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 A0A1W2PQJ5 194 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 SLC15A5A6NIM6 579 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 SOWAHDA6NJG2 315 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 TISP43B9A030 160 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 EPHB6O15197 1021 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 PSMC2P35998 433 aaKnown RBP28.11■■■□□ 2.09
CPNE1-205ENST00000401607 ARHGAP1Q07960 439 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 KCNH2Q12809 1159 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.11■■■□□ 2.09
CPNE1-205ENST00000401607 NPLOC4Q8TAT6 608 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 HVCN1Q96D96 273 aa28.11■■■□□ 2.09
CPNE1-205ENST00000401607 ADGRA3Q8IWK6 1321 aa28.1■■■□□ 2.09
CPNE1-205ENST00000401607 CYP2J2P51589 502 aa28.1■■■□□ 2.09
CPNE1-205ENST00000401607 PPP2R3AQ06190 1150 aa28.1■■■□□ 2.09
CPNE1-205ENST00000401607 MYBPC2Q14324 1141 aa28.1■■■□□ 2.09
CPNE1-205ENST00000401607 PLPPR4Q7Z2D5 763 aa28.1■■■□□ 2.09
CPNE1-205ENST00000401607 FAM186BQ8IYM0 893 aa28.1■■■□□ 2.09
CPNE1-205ENST00000401607 TMEM174Q8WUU8 243 aa28.1■■■□□ 2.09
CPNE1-205ENST00000401607 IQCDQ96DY2 449 aa28.1■■■□□ 2.09
CPNE1-205ENST00000401607 FAM167AQ96KS9 214 aa28.1■■■□□ 2.09
CPNE1-205ENST00000401607 TBX20Q9UMR3 447 aa28.1■■■□□ 2.09
CPNE1-205ENST00000401607 XRCC5P13010 732 aaKnown RBP28.09■■■□□ 2.09
CPNE1-205ENST00000401607 MTF1Q14872 753 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 GJC2Q5T442 439 aaPredicted RBP28.09■■■□□ 2.09
CPNE1-205ENST00000401607 RAD9BQ6WBX8 426 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 MAP4K3Q8IVH8 894 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 C12orf56Q8IXR9 622 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 OR8K1Q8NGG5 319 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 GLG1Q92896 1179 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms