RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 C12orf56Q8IXR9 622 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 ACCSQ96QU6 501 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 IWS1Q96ST2 819 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 RAVER2Q9HCJ3 691 aaKnown RBP11.74□□□□□ -0.53
LINC00649-202ENST00000400353 SIX2Q9NPC8 291 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 COL20A1Q9P218 1284 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 WRAP73Q9P2S5 460 aaPredicted RBP11.74□□□□□ -0.53
LINC00649-202ENST00000400353 PCDHGC5Q9Y5F6 944 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 GRID2IPA4D2P6 1211 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 CES2O00748 559 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 TFRCP02786 760 aaKnown RBP11.73□□□□□ -0.53
LINC00649-202ENST00000400353 ACTN1P12814 892 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 VCAM1P19320 739 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 OAZ1P54368 228 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 KRT76Q01546 638 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 MAPK7Q13164 816 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 PGM5Q15124 567 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 GLE1Q53GS7 698 aaKnown RBP11.73□□□□□ -0.53
LINC00649-202ENST00000400353 C4orf19Q8IY42 314 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 SCYL3Q8IZE3 742 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 SYCP3Q8IZU3 236 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 CPXCR1Q8N123 301 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 CCDC43Q96MW1 224 aaKnown RBP11.73□□□□□ -0.53
LINC00649-202ENST00000400353 SYT17Q9BSW7 474 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 ST6GALNAC4Q9H4F1 302 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 CEP83Q9Y592 693 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 DOCK1Q14185 1865 aa11.73□□□□□ -0.53
LINC00649-202ENST00000400353 A0A087X0T9 212 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 K7ENM7 598 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 DDX39AO00148 427 aaKnown RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 TULP2O00295 520 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 MAPK13O15264 365 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 P4HA2O15460 535 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 DKC1O60832 514 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 FAM228BP0C875 321 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 KRT13P13646 458 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 PLS3P13797 630 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 OAS2P29728 719 aaKnown RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 FMO5P49326 533 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 KCNA1Q09470 495 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 KIAA0753Q2KHM9 967 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 CFAP221Q4G0U5 840 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 ZC2HC1CQ53FD0 456 aaPredicted RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 RNF207Q6ZRF8 634 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 DRC1Q96MC2 740 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 RPAP3Q9H6T3 665 aaPredicted RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 ANKEF1Q9NU02 776 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 ADAMTS1Q9UHI8 967 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 ZNF112Q9UJU3 913 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 ZHX2Q9Y6X8 837 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 A0A0A6YYK5 440 aaPredicted RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 LOC102724159A0A0B4J2E5 919 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 NFKBIEO00221 500 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 PDE2AO00408 941 aaPredicted RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 ZBTB39O15060 712 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 ZNF185O15231 689 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 RARRES1P49788 294 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 GMPSP49915 693 aaPredicted RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 PSMC5P62195 406 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 MRPS9P82933 396 aaKnown RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 ARID5AQ03989 594 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 PTK2Q05397 1052 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 CETN1Q12798 172 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 ITGB3BPQ13352 177 aaPredicted RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 PWP2Q15269 919 aaKnown RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 MUM1L1Q5H9M0 696 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 SLC30A10Q6XR72 485 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 ZNF571Q7Z3V5 609 aaPredicted RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 NLRX1Q86UT6 975 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 APOBEC3FQ8IUX4 373 aaKnown RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 MICALL2Q8IY33 904 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 IL31RAQ8NI17 732 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 LMBR1Q8WVP7 490 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 HVCN1Q96D96 273 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 C12orf42Q96LP6 360 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 TRERF1Q96PN7 1200 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 TAAR1Q96RJ0 339 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 SENP7Q9BQF6 1050 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 TLR10Q9BXR5 811 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 STK33Q9BYT3 514 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 PXMP2Q9NR77 195 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 HACL1Q9UJ83 578 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 NENFQ9UMX5 172 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 SAMM50Q9Y512 469 aa11.72□□□□□ -0.53
LINC00649-202ENST00000400353 BRCA1P38398 1863 aaKnown RBP11.72□□□□□ -0.53
LINC00649-202ENST00000400353 SMCHD1A6NHR9 2005 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 WDR64B1ANS9 1081 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 C19orf81C9J6K1 198 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 BUB1O43683 1085 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 EXOC3O60645 756 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 PALMO75781 387 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 LMNB1P20700 586 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 KLRC1P26715 233 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 CCND2P30279 289 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 BACE1P56817 501 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 RPS6P62753 249 aaKnown RBP11.71□□□□□ -0.53
LINC00649-202ENST00000400353 MYL7Q01449 175 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 APBA1Q02410 837 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 C2orf54Q08AI8 447 aa11.71□□□□□ -0.53
LINC00649-202ENST00000400353 MTMR2Q13614 643 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms