RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 PPP6R2O75170 966 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 PARNO95453 639 aaKnown RBP17.56■□□□□ 0.4
MBD1-207ENST00000398488 EYA4O95677 639 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 PFKMP08237 780 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 PLCG1P19174 1290 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 FGFR4P22455 802 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 TMOD1P28289 359 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 ARL2P36404 184 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 ANP32AP39687 249 aaKnown RBP17.56■□□□□ 0.4
MBD1-207ENST00000398488 UBA7P41226 1012 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 CRYBB1P53674 252 aaPredicted RBP17.56■□□□□ 0.4
MBD1-207ENST00000398488 HABP4Q5JVS0 413 aaKnown RBP17.56■□□□□ 0.4
MBD1-207ENST00000398488 CNKSR3Q6P9H4 555 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.56■□□□□ 0.4
MBD1-207ENST00000398488 RTN4RL1Q86UN2 441 aaPredicted RBP17.56■□□□□ 0.4
MBD1-207ENST00000398488 LINC01599Q8WXQ3 324 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 MAP7D2Q96T17 732 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 MTRQ99707 1265 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 FDXACB1Q9BRP7 624 aaPredicted RBP17.56■□□□□ 0.4
MBD1-207ENST00000398488 RUSC1Q9BVN2 902 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 CCSER1Q9C0I3 900 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 TMX1Q9H3N1 280 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 PCDHA7Q9UN72 937 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 STK24Q9Y6E0 443 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 DGAT1O75907 488 aa17.55■□□□□ 0.4
MBD1-207ENST00000398488 SHC4Q6S5L8 630 aa17.55■□□□□ 0.4
MBD1-207ENST00000398488 TSHZ1Q6ZSZ6 1077 aa17.55■□□□□ 0.4
MBD1-207ENST00000398488 FAM228AQ86W67 206 aa17.55■□□□□ 0.4
MBD1-207ENST00000398488 BSNDQ8WZ55 320 aa17.55■□□□□ 0.4
MBD1-207ENST00000398488 IFIH1Q9BYX4 1025 aaKnown RBP17.55■□□□□ 0.4
MBD1-207ENST00000398488 PANK2Q9BZ23 570 aa17.55■□□□□ 0.4
MBD1-207ENST00000398488 ATP6V0A4Q9HBG4 840 aa17.55■□□□□ 0.4
MBD1-207ENST00000398488 ERVK-5Q9HDB9 667 aa17.55■□□□□ 0.4
MBD1-207ENST00000398488 PADI3Q9ULW8 664 aa17.55■□□□□ 0.4
MBD1-207ENST00000398488 DNM3Q9UQ16 869 aa17.55■□□□□ 0.4
MBD1-207ENST00000398488 PTPRSQ13332 1948 aa17.55■□□□□ 0.4
MBD1-207ENST00000398488 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.54■□□□□ 0.4
MBD1-207ENST00000398488 M0QZ92 97 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 CYP11B2P19099 503 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 GLRA2P23416 452 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 DEFB103AP81534 67 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 LAMTOR4Q0VGL1 99 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 ATL3Q6DD88 541 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 LEO1Q8WVC0 666 aaPredicted RBP17.54■□□□□ 0.4
MBD1-207ENST00000398488 NLRP4Q96MN2 994 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 POLR3FQ9H1D9 316 aaPredicted RBP17.54■□□□□ 0.4
MBD1-207ENST00000398488 MINDY3Q9H8M7 445 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 IFT122Q9HBG6 1241 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 GDPD2Q9HCC8 539 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 COL4A3BPQ9Y5P4 624 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 TCHHQ07283 1943 aa17.54■□□□□ 0.4
MBD1-207ENST00000398488 NPHP3-ACAD11A0A0J9YXS1 232 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 ZBBXA8MT70 800 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 MGEA5O60502 916 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 RPLP2P05387 115 aaKnown RBP17.53■□□□□ 0.4
MBD1-207ENST00000398488 PLA2G4BP0C869 781 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 SRGAP2CP0DJJ0 459 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 DARSP14868 501 aaKnown RBP17.53■□□□□ 0.4
MBD1-207ENST00000398488 DNM2P50570 870 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 SLC12A3P55017 1021 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 WDR5P61964 334 aaKnown RBP17.53■□□□□ 0.4
MBD1-207ENST00000398488 NUCB2P80303 420 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 NAALADL2Q58DX5 795 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 ARSHQ5FYA8 562 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 RINT1Q6NUQ1 792 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 C1orf186Q6ZWK4 172 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 DAW1Q8N136 415 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 NLRP7Q8WX94 980 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 PSPC1Q8WXF1 523 aaKnown RBP17.53■□□□□ 0.4
MBD1-207ENST00000398488 SEPT8Q92599 483 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 CCDC43Q96MW1 224 aaKnown RBP17.53■□□□□ 0.4
MBD1-207ENST00000398488 JPH2Q9BR39 696 aaPredicted RBP17.53■□□□□ 0.4
MBD1-207ENST00000398488 ST3GAL5Q9UNP4 418 aa17.53■□□□□ 0.4
MBD1-207ENST00000398488 A0A1W2PPC1 479 aa17.52■□□□□ 0.4
MBD1-207ENST00000398488 NCLP19338 710 aaKnown RBP17.52■□□□□ 0.4
MBD1-207ENST00000398488 CAPSQ13938 189 aa17.52■□□□□ 0.4
MBD1-207ENST00000398488 MCM6Q14566 821 aa17.52■□□□□ 0.4
MBD1-207ENST00000398488 FAM102BQ5T8I3 360 aa17.52■□□□□ 0.4
MBD1-207ENST00000398488 SYT2Q8N9I0 419 aaPredicted RBP17.52■□□□□ 0.4
MBD1-207ENST00000398488 CALML4Q96GE6 196 aa17.52■□□□□ 0.4
MBD1-207ENST00000398488 LRCH3Q96II8 777 aa17.52■□□□□ 0.4
MBD1-207ENST00000398488 CDK5RAP3Q96JB5 506 aa17.52■□□□□ 0.4
MBD1-207ENST00000398488 CFAP45Q9UL16 551 aa17.52■□□□□ 0.4
MBD1-207ENST00000398488 SQORQ9Y6N5 450 aa17.52■□□□□ 0.4
MBD1-207ENST00000398488 CUTAO60888 179 aa17.52■□□□□ 0.39
MBD1-207ENST00000398488 RPS6KA5O75582 802 aa17.52■□□□□ 0.39
MBD1-207ENST00000398488 SSBP05455 408 aaKnown RBP eCLIP17.52■□□□□ 0.39
MBD1-207ENST00000398488 EIF4BP23588 611 aaKnown RBP17.52■□□□□ 0.39
MBD1-207ENST00000398488 PBX2P40425 430 aa17.52■□□□□ 0.39
MBD1-207ENST00000398488 NFX1Q12986 1120 aaKnown RBP17.52■□□□□ 0.39
MBD1-207ENST00000398488 MAPK7Q13164 816 aa17.52■□□□□ 0.39
MBD1-207ENST00000398488 IKBKEQ14164 716 aa17.52■□□□□ 0.39
MBD1-207ENST00000398488 DHX8Q14562 1220 aaKnown RBP17.52■□□□□ 0.39
MBD1-207ENST00000398488 LRIT3Q3SXY7 679 aa17.52■□□□□ 0.39
MBD1-207ENST00000398488 KCNG4Q8TDN1 519 aa17.52■□□□□ 0.39
MBD1-207ENST00000398488 RAD54LQ92698 747 aa17.52■□□□□ 0.39
MBD1-207ENST00000398488 NT5C3AQ9H0P0 336 aa17.52■□□□□ 0.39
MBD1-207ENST00000398488 MICAL3Q7RTP6 2002 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 ABHD14A-ACY1A0A1B0GW23 586 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 ENPP3O14638 875 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms