RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 UBXN2AP68543 259 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 FAM133AQ8N9E0 248 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 JAKMIP2Q96AA8 810 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 CCDC42Q96M95 316 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 FGFBP2Q9BYJ0 223 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 NOL4O94818 638 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 YBX3P16989 372 aaKnown RBP eCLIP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 GARTP22102 1010 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 CASP5P51878 434 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 CETN1Q12798 172 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 IFI16Q16666 785 aaKnown RBP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 KLHDC7AQ5VTJ3 777 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 DPY19L2P1Q6NXN4 242 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 DHX38Q92620 1227 aaKnown RBP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 JPH2Q9BR39 696 aaPredicted RBP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 ZHX3Q9H4I2 956 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 RIPK3Q9Y572 518 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 TESPA1A2RU30 521 aaPredicted RBP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 CES2O00748 559 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 CKAP4Q07065 602 aaKnown RBP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 EXOC3L4Q17RC7 722 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 IQCEQ6IPM2 695 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 ZNF572Q7Z3I7 529 aaPredicted RBP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 TRIM58Q8NG06 486 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 TMEM134Q9H6X4 195 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 HOMER2Q9NSB8 354 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 NRBP2Q9NSY0 501 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 ASB14A6NK59 587 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 BACH1O14867 736 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 RRP9O43818 475 aaKnown RBP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 GRM1Q13255 1194 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 TCEAL1Q15170 157 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 TREML2Q5T2D2 321 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 KIAA1328Q86T90 577 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 CREBRFQ8IUR6 639 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 DHX37Q8IY37 1157 aaKnown RBP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 DAW1Q8N136 415 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 MSL3Q8N5Y2 521 aaKnown RBP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 GLIS3Q8NEA6 775 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 MMRN2Q9H8L6 949 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 DNAJC25-GNG10A0A024R161 153 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 A0A0A6YYK5 440 aaPredicted RBP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 RSPH10B2B2RC85 870 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 ATP8B1O43520 1251 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 RSPH10BP0C881 870 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 CCNA1P78396 465 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 PAPD7Q5XG87 772 aaKnown RBP8.08□□□□□ -1.12
RGPD1-201ENST00000398193 GPAT2Q6NUI2 795 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 SLC35C1Q96A29 364 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 IFT74Q96LB3 600 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 ALS2CR12Q96Q35 445 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 ZNF302Q9NR11 478 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 CDC23Q9UJX2 597 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 SAMM50Q9Y512 469 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 PCDHA13Q9Y5I0 950 aa8.08□□□□□ -1.12
RGPD1-201ENST00000398193 KIAA1217Q5T5P2 1943 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 LRRC53A6NM62 1247 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 ADM5C9JUS6 153 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 CETPP11597 493 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 PON1P27169 355 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 GTF2A2P52657 109 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 ACTR2P61160 394 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 ITIH3Q06033 890 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 XKR9Q5GH70 373 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 GADL1Q6ZQY3 521 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 PLPPR4Q7Z2D5 763 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 VPS36Q86VN1 386 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 ZNF592Q92610 1267 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 ASCC2Q9H1I8 757 aaPredicted RBP8.07□□□□□ -1.12
RGPD1-201ENST00000398193 CYP26B1Q9NR63 512 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 NENFQ9UMX5 172 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 REXO2Q9Y3B8 237 aaKnown RBP8.07□□□□□ -1.12
RGPD1-201ENST00000398193 RNF225M0QZC1 329 aaPredicted RBP8.07□□□□□ -1.12
RGPD1-201ENST00000398193 ZC3H11AO75152 810 aaKnown RBP eCLIP8.07□□□□□ -1.12
RGPD1-201ENST00000398193 OATP04181 439 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 GCLCP48506 637 aaPredicted RBP8.07□□□□□ -1.12
RGPD1-201ENST00000398193 NPEPPSP55786 919 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 KIF5AQ12840 1032 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 WNK4Q96J92 1243 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 STK33Q9BYT3 514 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 TAF1DQ9H5J8 278 aaPredicted RBP8.07□□□□□ -1.12
RGPD1-201ENST00000398193 AGPAT5Q9NUQ2 364 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 RNF14Q9UBS8 474 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 STYXL1Q9Y6J8 313 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 RGS20O76081 388 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 MCM3P25205 808 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 KIF11P52732 1056 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 POU5F1Q01860 360 aaKnown RBP8.07□□□□□ -1.12
RGPD1-201ENST00000398193 CACNB1Q02641 598 aaPredicted RBP8.07□□□□□ -1.12
RGPD1-201ENST00000398193 BFSP1Q12934 665 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 SYCP3Q8IZU3 236 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 ANKRD35Q8N283 1001 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 MNS1Q8NEH6 495 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 TCP11Q8WWU5 503 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 EMID1Q96A84 441 aaPredicted RBP8.07□□□□□ -1.12
RGPD1-201ENST00000398193 TBX20Q9UMR3 447 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 COL1A2P08123 1366 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 EMSYQ7Z589 1322 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 SYNGAP1Q96PV0 1343 aa8.07□□□□□ -1.12
RGPD1-201ENST00000398193 RBM47A0AV96 593 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms