RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SARSP49591 514 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 HMGCS2P54868 508 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 FAM102BQ5T8I3 360 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 ANKRD23Q86SG2 305 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 PAGR1Q9BTK6 254 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 MAK16Q9BXY0 300 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 IQCGQ9H095 443 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 SLC38A10Q9HBR0 1119 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CACNA1HO95180 2353 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 NEFHP12036 1026 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 STAT5BP51692 787 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 EIF3BP55884 814 aaKnown RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF827Q17R98 1081 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 METTL13Q8N6R0 699 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 FUCA2Q9BTY2 467 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 SAMSN1Q9NSI8 373 aaKnown RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 GJB4Q9NTQ9 266 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 WDR35Q9P2L0 1181 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 AHCTF1Q8WYP5 2266 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 PGRMC1O00264 195 aaKnown RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 CALB1P05937 261 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 MAPK4P31152 587 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ADKP55263 362 aaKnown RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 CUL4BQ13620 913 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 PPP1R21Q6ZMI0 780 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 TTC13Q8NBP0 860 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 C12orf42Q96LP6 360 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 PLIN2Q99541 437 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 SUGCTQ9HAC7 445 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 NLRC4Q9NPP4 1024 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.66□□□□□ -1.823e-10■■■■■ 94.2
VPS13C-203ENST00000395896 LYPLA2O95372 231 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 GGPS1O95749 300 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 TYW1BQ6NUM6 668 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ZPBP2Q6X784 338 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 SRGAP1Q7Z6B7 1085 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 SEPT1Q8WYJ6 367 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF830Q96NB3 372 aaPredicted RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 STIM2Q9P246 746 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 CAPN15O75808 1086 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 PRLRP16471 622 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 NAMPTP43490 491 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 GPRC5AQ8NFJ5 357 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 WHAMMQ8TF30 809 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 FOXP3Q9BZS1 431 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 TRAF3IP3Q9Y228 551 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 CYTH3O43739 400 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 TDP2O95551 362 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 GARTP22102 1010 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 HOXA13P31271 388 aaPredicted RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 GUCY1A2P33402 732 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 PLCB3Q01970 1234 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ITIH3Q06033 890 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 FUT2Q10981 343 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 NINQ8N4C6 2090 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 SHANK3Q9BYB0 1731 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 SMAPO00193 183 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 MSCO60682 206 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 GZMAP12544 262 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 GMPSP49915 693 aaPredicted RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 HYIQ5T013 277 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 TRMT1LQ7Z2T5 733 aaKnown RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 MTRQ99707 1265 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 MOV10L1Q9BXT6 1211 aaKnown RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 TMEM39BQ9GZU3 492 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 DDX41Q9UJV9 622 aaKnown RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 MCM3APO60318 1980 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 RGPD3A6NKT7 1758 aaPredicted RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 RGPD4Q7Z3J3 1758 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 MYBL1P10243 752 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 MYL7Q01449 175 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF662Q6ZS27 426 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 P3H4Q92791 437 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 CCDC127Q96BQ5 260 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF302Q9NR11 478 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 SP4Q02446 784 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ENOX2Q16206 610 aaKnown RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 TSC1Q92574 1164 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 RPS6KC1Q96S38 1066 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 OGFRQ9NZT2 677 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 KRT7P08729 469 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF18P17022 549 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 CYP11B2P19099 503 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 CAV1Q03135 178 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 COASYQ13057 564 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 SLC9A9Q8IVB4 645 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 NHEJ1Q9H9Q4 299 aaPredicted RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 KCND1Q9NSA2 647 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 UVRAGQ9P2Y5 699 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ADAMTS1Q9UHI8 967 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 PCDHB2Q9Y5E7 798 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 PLS3P13797 630 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 CDC25AP30304 524 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 POLR2FP61218 127 aaKnown RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 GABPB1Q06547 395 aaPredicted RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 MCM6Q14566 821 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 IER5Q5VY09 327 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 TMEM35BQ8NCS4 154 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 TSPAN18Q96SJ8 248 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 NSRP1Q9H0G5 558 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms