RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LRRC43Q8N309 656 aa23.92■■□□□ 1.42
TRAF4-203ENST00000394925 LRRC71Q8N4P6 559 aa23.92■■□□□ 1.42
TRAF4-203ENST00000394925 RNF169Q8NCN4 708 aa23.92■■□□□ 1.42
TRAF4-203ENST00000394925 ZNF668Q96K58 619 aaPredicted RBP23.92■■□□□ 1.42
TRAF4-203ENST00000394925 MAP7D2Q96T17 732 aa23.92■■□□□ 1.42
TRAF4-203ENST00000394925 ADAMTS10Q9H324 1103 aa23.92■■□□□ 1.42
TRAF4-203ENST00000394925 TMOD1P28289 359 aa23.91■■□□□ 1.42
TRAF4-203ENST00000394925 PPM1AP35813 382 aa23.91■■□□□ 1.42
TRAF4-203ENST00000394925 PRR16Q569H4 304 aa23.91■■□□□ 1.42
TRAF4-203ENST00000394925 ECHDC2Q86YB7 292 aa23.91■■□□□ 1.42
TRAF4-203ENST00000394925 REXO1Q8N1G1 1221 aaKnown RBP23.91■■□□□ 1.42
TRAF4-203ENST00000394925 ZMYND12Q9H0C1 365 aa23.91■■□□□ 1.42
TRAF4-203ENST00000394925 C6orf50Q9HD87 102 aa23.91■■□□□ 1.42
TRAF4-203ENST00000394925 SPG21Q9NZD8 308 aa23.91■■□□□ 1.42
TRAF4-203ENST00000394925 ZFHX2Q9C0A1 2572 aaPredicted RBP23.9■■□□□ 1.42
TRAF4-203ENST00000394925 HOXB8P17481 243 aaPredicted RBP23.9■■□□□ 1.42
TRAF4-203ENST00000394925 EIF4BP23588 611 aaKnown RBP23.9■■□□□ 1.42
TRAF4-203ENST00000394925 MCTP2Q6DN12 878 aa23.9■■□□□ 1.42
TRAF4-203ENST00000394925 LINC01465Q8N7H1 131 aa23.9■■□□□ 1.42
TRAF4-203ENST00000394925 FAM167AQ96KS9 214 aa23.9■■□□□ 1.42
TRAF4-203ENST00000394925 TSHZ2Q9NRE2 1034 aa23.9■■□□□ 1.42
TRAF4-203ENST00000394925 CDH22Q9UJ99 828 aa23.9■■□□□ 1.42
TRAF4-203ENST00000394925 MYO10Q9HD67 2058 aa23.9■■□□□ 1.42
TRAF4-203ENST00000394925 ESYT2A0FGR8 921 aa23.89■■□□□ 1.41
TRAF4-203ENST00000394925 AVPR2P30518 371 aa23.89■■□□□ 1.41
TRAF4-203ENST00000394925 METAP2P50579 478 aaKnown RBP eCLIP23.89■■□□□ 1.41
TRAF4-203ENST00000394925 RCAN1P53805 252 aa23.89■■□□□ 1.41
TRAF4-203ENST00000394925 FGD1P98174 961 aa23.89■■□□□ 1.41
TRAF4-203ENST00000394925 TSGA10IPQ3SY00 556 aa23.89■■□□□ 1.41
TRAF4-203ENST00000394925 CLLU1OSQ5K130 101 aa23.89■■□□□ 1.41
TRAF4-203ENST00000394925 FAM86C1Q9NVL1 165 aa23.89■■□□□ 1.41
TRAF4-203ENST00000394925 WDR64B1ANS9 1081 aa23.88■■□□□ 1.41
TRAF4-203ENST00000394925 ZNF862O60290 1169 aa23.88■■□□□ 1.41
TRAF4-203ENST00000394925 FGFR4P22455 802 aa23.88■■□□□ 1.41
TRAF4-203ENST00000394925 CCDC12Q8WUD4 166 aaPredicted RBP23.88■■□□□ 1.41
TRAF4-203ENST00000394925 CASP10Q92851 521 aa23.88■■□□□ 1.41
TRAF4-203ENST00000394925 SCLT1Q96NL6 688 aa23.88■■□□□ 1.41
TRAF4-203ENST00000394925 NRBP2Q9NSY0 501 aa23.88■■□□□ 1.41
TRAF4-203ENST00000394925 CCDC196A0A1B0GTZ2 297 aa23.87■■□□□ 1.41
TRAF4-203ENST00000394925 PDGFBP01127 241 aaPredicted RBP23.87■■□□□ 1.41
TRAF4-203ENST00000394925 OATP04181 439 aa23.87■■□□□ 1.41
TRAF4-203ENST00000394925 CA8P35219 290 aa23.87■■□□□ 1.41
TRAF4-203ENST00000394925 GPC3P51654 580 aa23.87■■□□□ 1.41
TRAF4-203ENST00000394925 KRT32Q14532 448 aa23.87■■□□□ 1.41
TRAF4-203ENST00000394925 SMC1AQ14683 1233 aaKnown RBP23.87■■□□□ 1.41
TRAF4-203ENST00000394925 TPRNQ4KMQ1 711 aa23.87■■□□□ 1.41
TRAF4-203ENST00000394925 SLC39A11Q8N1S5 342 aa23.87■■□□□ 1.41
TRAF4-203ENST00000394925 MRPL43Q8N983 215 aaKnown RBP23.87■■□□□ 1.41
TRAF4-203ENST00000394925 HELQQ8TDG4 1101 aa23.87■■□□□ 1.41
TRAF4-203ENST00000394925 DISC1Q9NRI5 854 aa23.87■■□□□ 1.41
TRAF4-203ENST00000394925 NR2E1Q9Y466 385 aa23.87■■□□□ 1.41
TRAF4-203ENST00000394925 HCFC2Q9Y5Z7 792 aa23.87■■□□□ 1.41
TRAF4-203ENST00000394925 C2orf71A6NGG8 1288 aa23.86■■□□□ 1.41
TRAF4-203ENST00000394925 DARSP14868 501 aaKnown RBP23.86■■□□□ 1.41
TRAF4-203ENST00000394925 CPA1P15085 419 aa23.86■■□□□ 1.41
TRAF4-203ENST00000394925 GNA11P29992 359 aa23.86■■□□□ 1.41
TRAF4-203ENST00000394925 CIITAP33076 1130 aa23.86■■□□□ 1.41
TRAF4-203ENST00000394925 PRKCEQ02156 737 aa23.86■■□□□ 1.41
TRAF4-203ENST00000394925 CES5AQ6NT32 575 aa23.86■■□□□ 1.41
TRAF4-203ENST00000394925 ZNF710Q8N1W2 664 aa23.86■■□□□ 1.41
TRAF4-203ENST00000394925 KREMEN2Q8NCW0 462 aa23.86■■□□□ 1.41
TRAF4-203ENST00000394925 LENG9Q96B70 501 aa23.86■■□□□ 1.41
TRAF4-203ENST00000394925 RIPOR3Q96MK2 946 aa23.86■■□□□ 1.41
TRAF4-203ENST00000394925 A0A0U1RQF3 1178 aa23.85■■□□□ 1.41
TRAF4-203ENST00000394925 NT5C1B-RDH14C9J2C7 533 aa23.85■■□□□ 1.41
TRAF4-203ENST00000394925 ST18O60284 1047 aa23.85■■□□□ 1.41
TRAF4-203ENST00000394925 HMGB1P09429 215 aaKnown RBP23.85■■□□□ 1.41
TRAF4-203ENST00000394925 UGCGQ16739 394 aa23.85■■□□□ 1.41
TRAF4-203ENST00000394925 BMP2KLQ5H9B9 411 aa23.85■■□□□ 1.41
TRAF4-203ENST00000394925 SKAP1Q86WV1 359 aa23.85■■□□□ 1.41
TRAF4-203ENST00000394925 NLRP7Q8WX94 980 aa23.85■■□□□ 1.41
TRAF4-203ENST00000394925 POMKQ9H5K3 350 aa23.85■■□□□ 1.41
TRAF4-203ENST00000394925 CFAP54Q96N23 3096 aa23.85■■□□□ 1.41
TRAF4-203ENST00000394925 PRPF3O43395 683 aaKnown RBP23.84■■□□□ 1.41
TRAF4-203ENST00000394925 CHMP2AO43633 222 aa23.84■■□□□ 1.41
TRAF4-203ENST00000394925 CLASP2O75122 1294 aaKnown RBP23.84■■□□□ 1.41
TRAF4-203ENST00000394925 CSDE1O75534 798 aaKnown RBP23.84■■□□□ 1.41
TRAF4-203ENST00000394925 EOMESO95936 686 aa23.84■■□□□ 1.41
TRAF4-203ENST00000394925 Q6ZUG5 572 aa23.84■■□□□ 1.41
TRAF4-203ENST00000394925 ZNF598Q86UK7 904 aaKnown RBP23.84■■□□□ 1.41
TRAF4-203ENST00000394925 ATOH1Q92858 354 aaPredicted RBP23.84■■□□□ 1.41
TRAF4-203ENST00000394925 PHKBQ93100 1093 aa23.84■■□□□ 1.41
TRAF4-203ENST00000394925 ADAM7Q9H2U9 754 aa23.84■■□□□ 1.41
TRAF4-203ENST00000394925 C2CD4DB7Z1M9 353 aa23.83■■□□□ 1.41
TRAF4-203ENST00000394925 MSH4O15457 936 aa23.83■■□□□ 1.41
TRAF4-203ENST00000394925 CXCL14O95715 111 aa23.83■■□□□ 1.41
TRAF4-203ENST00000394925 ALDH7A1P49419 539 aaKnown RBP23.83■■□□□ 1.41
TRAF4-203ENST00000394925 BCAR1P56945 870 aa23.83■■□□□ 1.41
TRAF4-203ENST00000394925 ITIH3Q06033 890 aa23.83■■□□□ 1.41
TRAF4-203ENST00000394925 TBC1D8BQ0IIM8 1120 aa23.83■■□□□ 1.41
TRAF4-203ENST00000394925 BICD2Q8TD16 824 aa23.83■■□□□ 1.41
TRAF4-203ENST00000394925 BRF1Q92994 677 aa23.83■■□□□ 1.41
TRAF4-203ENST00000394925 NECTIN4Q96NY8 510 aa23.83■■□□□ 1.41
TRAF4-203ENST00000394925 MRPL9Q9BYD2 267 aaKnown RBP23.83■■□□□ 1.41
TRAF4-203ENST00000394925 IRF2BPLQ9H1B7 796 aa23.83■■□□□ 1.41
TRAF4-203ENST00000394925 DACT1Q9NYF0 836 aa23.83■■□□□ 1.41
TRAF4-203ENST00000394925 GFRA3O60609 400 aa23.82■■□□□ 1.4
TRAF4-203ENST00000394925 GAS7O60861 476 aa23.82■■□□□ 1.4
TRAF4-203ENST00000394925 WEE2P0C1S8 567 aa23.82■■□□□ 1.4
TRAF4-203ENST00000394925 AKAP17AQ02040 695 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms