RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 KRT14P02533 472 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 FMO5P49326 533 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 NBPF9Q3BBW0 867 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 KCTD16Q68DU8 428 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 EMBQ6PCB8 327 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 SH2D3CQ8N5H7 860 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 ZNF341Q9BYN7 854 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 PCIF1Q9H4Z3 704 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 GDF3Q9NR23 364 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 RAD51CO43502 376 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 CEP104O60308 925 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 ARHGAP44Q17R89 818 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 GLYCTKQ8IVS8 523 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 HOOK2Q96ED9 719 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 CCDC43Q96MW1 224 aaKnown RBP21.31■■□□□ 1
RCCD1-201ENST00000394258 EHMT1Q9H9B1 1298 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 DNAJC12Q9UKB3 198 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 SYNPO2Q9UMS6 1093 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 FRMD4BQ9Y2L6 1034 aa21.31■■□□□ 1
RCCD1-201ENST00000394258 FRMPD4Q14CM0 1322 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 EXOC3O60645 756 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 TTC31Q49AM3 519 aaPredicted RBP21.3■■□□□ 1
RCCD1-201ENST00000394258 ICE2Q659A1 982 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 IFT20Q8IY31 132 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 TTLL6Q8N841 843 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 SH3GL2Q99962 352 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 AP1M1Q9BXS5 423 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 KCNH7Q9NS40 1196 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 RNF14Q9UBS8 474 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 TMEM150BA6NC51 233 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 H2AFZP0C0S5 128 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 PRKCIP41743 596 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 DRAP1Q14919 205 aaPredicted RBP21.3■■□□□ 1
RCCD1-201ENST00000394258 PAXIP1Q6ZW49 1069 aaPredicted RBP21.3■■□□□ 1
RCCD1-201ENST00000394258 H2AFVQ71UI9 128 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 VPS36Q86VN1 386 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 CAVIN3Q969G5 261 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 MXRA8Q9BRK3 442 aa21.3■■□□□ 1
RCCD1-201ENST00000394258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.3■■□□□ 11e-10■■■■■ 70.9
RCCD1-201ENST00000394258 SEPT11Q9NVA2 429 aaKnown RBP21.3■■□□□ 1
RCCD1-201ENST00000394258 KIF4AO95239 1232 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 ABCB4P21439 1286 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 STAT1P42224 750 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 DAW1Q8N136 415 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 USP38Q8NB14 1042 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 FEM1BQ9UK73 627 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 HSF2BPO75031 334 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 LRRN2O75325 713 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 C10orf76Q5T2E6 689 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 PADI6Q6TGC4 694 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 MIER3Q7Z3K6 550 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 FAM160B2Q86V87 743 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 TPCN2Q8NHX9 752 aa21.29■■□□□ 1
RCCD1-201ENST00000394258 K7ENM7 598 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 ALAS1P13196 640 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 IRAK1P51617 712 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 GLE1Q53GS7 698 aaKnown RBP21.28■■□□□ 1
RCCD1-201ENST00000394258 LRRC57Q8N9N7 239 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 LNX1Q8TBB1 728 aaPredicted RBP21.28■■□□□ 1
RCCD1-201ENST00000394258 RUBCNQ92622 972 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 F8VZ95 297 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 TNFRSF8P28908 595 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 ZNF131P52739 623 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 GALCP54803 685 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 PPARDQ03181 441 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 DAAM2Q86T65 1068 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 OSGEPQ9NPF4 335 aa21.28■■□□□ 1
RCCD1-201ENST00000394258 SOX5P35711 763 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 DLG4P78352 724 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 PEX26Q7Z412 305 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 DDX42Q86XP3 938 aaKnown RBP eCLIP21.27■■□□□ 1
RCCD1-201ENST00000394258 RUFY1Q96T51 708 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 COL2A1P02458 1487 aaPredicted RBP21.27■■□□□ 1
RCCD1-201ENST00000394258 MYH11P35749 1972 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 COL4A5P29400 1685 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 ZNF536O15090 1300 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 GTPBP10A4D1E9 387 aaKnown RBP21.27■■□□□ 1
RCCD1-201ENST00000394258 FERP16591 822 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 MAGEA9P43362 315 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 SETQ01105 290 aaPredicted RBP21.27■■□□□ 1
RCCD1-201ENST00000394258 MAPK7Q13164 816 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 STXBP4Q6ZWJ1 553 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 METTL13Q8N6R0 699 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 PIK3R5Q8WYR1 880 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 INTS2Q9H0H0 1204 aaKnown RBP21.27■■□□□ 1
RCCD1-201ENST00000394258 RAVER2Q9HCJ3 691 aaKnown RBP21.27■■□□□ 1
RCCD1-201ENST00000394258 SEL1LQ9UBV2 794 aa21.27■■□□□ 1
RCCD1-201ENST00000394258 LOC102724159A0A0B4J2E5 919 aa21.26■□□□□ 0.99
RCCD1-201ENST00000394258 SHOX2O60902 331 aaPredicted RBP21.26■□□□□ 0.99
RCCD1-201ENST00000394258 PWP2Q15269 919 aaKnown RBP21.26■□□□□ 0.99
RCCD1-201ENST00000394258 STK32BQ9NY57 414 aa21.26■□□□□ 0.99
RCCD1-201ENST00000394258 FBXL5Q9UKA1 691 aa21.26■□□□□ 0.99
RCCD1-201ENST00000394258 ODF2LQ9ULJ1 636 aa21.26■□□□□ 0.99
RCCD1-201ENST00000394258 ZNF233A6NK53 670 aa21.26■□□□□ 0.99
RCCD1-201ENST00000394258 PPFIA4O75335 1185 aa21.26■□□□□ 0.99
RCCD1-201ENST00000394258 ATP1A2P50993 1020 aa21.26■□□□□ 0.99
RCCD1-201ENST00000394258 ZNF772Q68DY9 489 aaPredicted RBP21.26■□□□□ 0.99
RCCD1-201ENST00000394258 B3GNT9Q6UX72 402 aa21.26■□□□□ 0.99
RCCD1-201ENST00000394258 KCTD17Q8N5Z5 321 aa21.26■□□□□ 0.99
RCCD1-201ENST00000394258 ZSWIM2Q8NEG5 633 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms