RNA–Protein interactions for RNA: ENST00000392407.6

MUC4-205, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,645 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-205ENST00000392407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.62□□□□□ -0.399e-13■■■■■ 192.3
MUC4-205ENST00000392407 MTUS1Q9ULD2 1270 aa12.62□□□□□ -0.39
MUC4-205ENST00000392407 THRAP3Q9Y2W1 955 aaKnown RBP12.62□□□□□ -0.39
MUC4-205ENST00000392407 PARP4Q9UKK3 1724 aaKnown RBP12.62□□□□□ -0.39
MUC4-205ENST00000392407 KDM3AQ9Y4C1 1321 aa12.62□□□□□ -0.39
MUC4-205ENST00000392407 FAM187AA6NFU0 413 aa12.62□□□□□ -0.39
MUC4-205ENST00000392407 DDX3XO00571 662 aaKnown RBP eCLIP12.62□□□□□ -0.39
MUC4-205ENST00000392407 SPOPO43791 374 aa12.62□□□□□ -0.39
MUC4-205ENST00000392407 SNX3O60493 162 aa12.62□□□□□ -0.39
MUC4-205ENST00000392407 LMNB1P20700 586 aa12.62□□□□□ -0.39
MUC4-205ENST00000392407 PTENP60484 403 aa12.62□□□□□ -0.39
MUC4-205ENST00000392407 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
MUC4-205ENST00000392407 RFFLQ8WZ73 363 aa12.62□□□□□ -0.39
MUC4-205ENST00000392407 SH3GL3Q99963 347 aa12.62□□□□□ -0.39
MUC4-205ENST00000392407 ZNF804BA4D1E1 1349 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 POTEFA5A3E0 1075 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 POTEIP0CG38 1075 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 STAT3P40763 770 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 SESN3P58005 492 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 MAPK7Q13164 816 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 PDIA5Q14554 519 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 ECM1Q16610 540 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 POTEGQ6S5H5 508 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 POTEEQ6S8J3 1075 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 SFR1Q86XK3 245 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 SLC17A8Q8NDX2 589 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 ATXN2LQ8WWM7 1075 aaKnown RBP12.61□□□□□ -0.39
MUC4-205ENST00000392407 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 EBF2Q9HAK2 575 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 ERVK-5Q9HDB9 667 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 CASZ1Q86V15 1759 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 CRKLP46109 303 aaKnown RBP12.61□□□□□ -0.39
MUC4-205ENST00000392407 ZNF131P52739 623 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 CCDC6Q16204 474 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 ANKRD20A2Q5SQ80 823 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 ANKRD20A1Q5TYW2 823 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 ANKRD20A3Q5VUR7 823 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 RAB3IPQ96QF0 476 aaPredicted RBP12.61□□□□□ -0.39
MUC4-205ENST00000392407 MTMR9Q96QG7 549 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 CHORDC1Q9UHD1 332 aaPredicted RBP12.61□□□□□ -0.39
MUC4-205ENST00000392407 ARL2BPQ9Y2Y0 163 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 AFF2P51816 1311 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 KCNJ1P48048 391 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 CYP4A11Q02928 519 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 DHX34Q14147 1143 aaKnown RBP12.61□□□□□ -0.39
MUC4-205ENST00000392407 ZCWPW2Q504Y3 356 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 CCDC137Q6PK04 289 aaKnown RBP12.61□□□□□ -0.39
MUC4-205ENST00000392407 PIGWQ7Z7B1 504 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 COL23A1Q86Y22 540 aaPredicted RBP12.61□□□□□ -0.39
MUC4-205ENST00000392407 MAB21L3Q8N8X9 362 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 RDH13Q8NBN7 331 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
MUC4-205ENST00000392407 TGS1Q96RS0 853 aaKnown RBP12.61□□□□□ -0.39
MUC4-205ENST00000392407 PPP1R12CQ9BZL4 782 aa12.61□□□□□ -0.39
MUC4-205ENST00000392407 RTN2O75298 545 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 ATP5DP30049 168 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 RIPK1Q13546 671 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 SNX1Q13596 522 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 GRIPAP1Q4V328 841 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 CEP95Q96GE4 821 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 ZNF570Q96NI8 536 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 RUNDC3BQ96NL0 473 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 BSDC1Q9NW68 430 aaPredicted RBP12.6□□□□□ -0.39
MUC4-205ENST00000392407 LRRD1A4D1F6 860 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 BRAFP15056 766 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 RPS8P62241 208 aaKnown RBP12.6□□□□□ -0.39
MUC4-205ENST00000392407 DUPD1Q68J44 220 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 ZNF449Q6P9G9 518 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 PPP4R3CPQ6ZMV5 832 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 PARD3BQ8TEW8 1205 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 PASKQ96RG2 1323 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 BTNL10A8MVZ5 291 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 NR3C1P04150 777 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 RARAP10276 462 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 RASA1P20936 1047 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 RPL21P46778 160 aaKnown RBP12.6□□□□□ -0.39
MUC4-205ENST00000392407 CDK8P49336 464 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 CASP4P49662 377 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 CYP2J2P51589 502 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 RAD23BP54727 409 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 DRAP1Q14919 205 aaPredicted RBP12.6□□□□□ -0.39
MUC4-205ENST00000392407 TRIP13Q15645 432 aaPredicted RBP12.6□□□□□ -0.39
MUC4-205ENST00000392407 CNGA2Q16280 664 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 ATP8B4Q8TF62 1192 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 TSC22D3Q99576 134 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 DDX23Q9BUQ8 820 aaKnown RBP12.6□□□□□ -0.39
MUC4-205ENST00000392407 METTL14Q9HCE5 456 aaKnown RBP12.6□□□□□ -0.39
MUC4-205ENST00000392407 DNAJC12Q9UKB3 198 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 DNM3Q9UQ16 869 aa12.6□□□□□ -0.39
MUC4-205ENST00000392407 TNS2Q63HR2 1409 aa12.59□□□□□ -0.39
MUC4-205ENST00000392407 EME2A4GXA9 379 aaPredicted RBP12.59□□□□□ -0.39
MUC4-205ENST00000392407 SFI1A8K8P3 1242 aa12.59□□□□□ -0.39
MUC4-205ENST00000392407 NTSR2O95665 410 aa12.59□□□□□ -0.39
MUC4-205ENST00000392407 LDHCP07864 332 aa12.59□□□□□ -0.39
MUC4-205ENST00000392407 NUDT17P0C025 328 aa12.59□□□□□ -0.39
MUC4-205ENST00000392407 NEFHP12036 1026 aa12.59□□□□□ -0.39
MUC4-205ENST00000392407 ZNF268Q14587 947 aaPredicted RBP12.59□□□□□ -0.39
MUC4-205ENST00000392407 KNOP1Q1ED39 458 aaKnown RBP12.59□□□□□ -0.39
MUC4-205ENST00000392407 C3orf67Q6ZVT6 689 aa12.59□□□□□ -0.39
MUC4-205ENST00000392407 SRRM1Q8IYB3 904 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms