RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 NRBP2Q9NSY0 501 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 SPG21Q9NZD8 308 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 HCSTQ9UBK5 93 aa18.1■□□□□ 0.49
VCX3A-201ENST00000381089 WDR64B1ANS9 1081 aa18.09■□□□□ 0.49
VCX3A-201ENST00000381089 EIF4BP23588 611 aaKnown RBP18.09■□□□□ 0.49
VCX3A-201ENST00000381089 CLCN3P51790 818 aa18.09■□□□□ 0.49
VCX3A-201ENST00000381089 SMC1AQ14683 1233 aaKnown RBP18.09■□□□□ 0.49
VCX3A-201ENST00000381089 PRR16Q569H4 304 aa18.09■□□□□ 0.49
VCX3A-201ENST00000381089 CES5AQ6NT32 575 aa18.09■□□□□ 0.49
VCX3A-201ENST00000381089 EFCAB12Q6NXP0 572 aa18.09■□□□□ 0.49
VCX3A-201ENST00000381089 BICD2Q8TD16 824 aa18.09■□□□□ 0.49
VCX3A-201ENST00000381089 NECTIN4Q96NY8 510 aa18.09■□□□□ 0.49
VCX3A-201ENST00000381089 MRPL9Q9BYD2 267 aaKnown RBP18.09■□□□□ 0.49
VCX3A-201ENST00000381089 ZMYND12Q9H0C1 365 aa18.09■□□□□ 0.49
VCX3A-201ENST00000381089 S1PR5Q9H228 398 aa18.09■□□□□ 0.49
VCX3A-201ENST00000381089 AKAP17AQ02040 695 aaKnown RBP18.08■□□□□ 0.48
VCX3A-201ENST00000381089 KCNC3Q14003 757 aa18.08■□□□□ 0.48
VCX3A-201ENST00000381089 ECHDC2Q86YB7 292 aa18.08■□□□□ 0.48
VCX3A-201ENST00000381089 TMEM87AQ8NBN3 555 aa18.08■□□□□ 0.48
VCX3A-201ENST00000381089 RNF169Q8NCN4 708 aa18.08■□□□□ 0.48
VCX3A-201ENST00000381089 CRYGNQ8WXF5 182 aa18.08■□□□□ 0.48
VCX3A-201ENST00000381089 APOL5Q9BWW9 433 aa18.08■□□□□ 0.48
VCX3A-201ENST00000381089 TSHZ2Q9NRE2 1034 aa18.08■□□□□ 0.48
VCX3A-201ENST00000381089 DACT1Q9NYF0 836 aa18.08■□□□□ 0.48
VCX3A-201ENST00000381089 CARNS1A5YM72 827 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 HIDE1A8MVS5 230 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 ST18O60284 1047 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 EOMESO95936 686 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 OATP04181 439 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 CDC27P30260 824 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 CA8P35219 290 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 NUBP1P53384 320 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 ITIH3Q06033 890 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 TCF15Q12870 199 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 TSGA10IPQ3SY00 556 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 SYCE2Q6PIF2 218 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 LRRC55Q6ZSA7 311 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 RSPH1Q8WYR4 309 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 ASIC4Q96FT7 647 aa18.07■□□□□ 0.48
VCX3A-201ENST00000381089 FAM217BQ9NTX9 383 aaPredicted RBP18.07■□□□□ 0.48
VCX3A-201ENST00000381089 AVPR2P30518 371 aa18.06■□□□□ 0.48
VCX3A-201ENST00000381089 ADD1P35611 737 aaKnown RBP18.06■□□□□ 0.48
VCX3A-201ENST00000381089 ALDH7A1P49419 539 aaKnown RBP18.06■□□□□ 0.48
VCX3A-201ENST00000381089 CDC42EP1Q00587 391 aa18.06■□□□□ 0.48
VCX3A-201ENST00000381089 MTMR3Q13615 1198 aa18.06■□□□□ 0.48
VCX3A-201ENST00000381089 BMP2KLQ5H9B9 411 aa18.06■□□□□ 0.48
VCX3A-201ENST00000381089 UBALD2Q8IYN6 164 aa18.06■□□□□ 0.48
VCX3A-201ENST00000381089 LRRC71Q8N4P6 559 aa18.06■□□□□ 0.48
VCX3A-201ENST00000381089 CCDC148Q8NFR7 591 aa18.06■□□□□ 0.48
VCX3A-201ENST00000381089 NLRP7Q8WX94 980 aa18.06■□□□□ 0.48
VCX3A-201ENST00000381089 PHOX2BQ99453 314 aa18.06■□□□□ 0.48
VCX3A-201ENST00000381089 ADAMTS10Q9H324 1103 aa18.06■□□□□ 0.48
VCX3A-201ENST00000381089 DISC1Q9NRI5 854 aa18.06■□□□□ 0.48
VCX3A-201ENST00000381089 KMT2EQ8IZD2 1858 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 A0A0U1RQF3 1178 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 DARSP14868 501 aaKnown RBP18.05■□□□□ 0.48
VCX3A-201ENST00000381089 SP100P23497 879 aaPredicted RBP18.05■□□□□ 0.48
VCX3A-201ENST00000381089 SFNP31947 248 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 CIITAP33076 1130 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 PBX3P40426 434 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 MTHFRP42898 656 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 PRKCEQ02156 737 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 TBC1D8BQ0IIM8 1120 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 ADCK5Q3MIX3 580 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 MRPL43Q8N983 215 aaKnown RBP18.05■□□□□ 0.48
VCX3A-201ENST00000381089 ATOH1Q92858 354 aaPredicted RBP18.05■□□□□ 0.48
VCX3A-201ENST00000381089 TMEM169Q96HH4 297 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 RIPOR3Q96MK2 946 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 ADAM7Q9H2U9 754 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 RNF19AQ9NV58 838 aa18.05■□□□□ 0.48
VCX3A-201ENST00000381089 PRPF3O43395 683 aaKnown RBP18.04■□□□□ 0.48
VCX3A-201ENST00000381089 GAS7O60861 476 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 GPC3P51654 580 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 JAK3P52333 1124 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 VCPP55072 806 aaKnown RBP18.04■□□□□ 0.48
VCX3A-201ENST00000381089 RASEFQ8IZ41 740 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 SLC39A11Q8N1S5 342 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 LINC01465Q8N7H1 131 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 KREMEN2Q8NCW0 462 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 HELQQ8TDG4 1101 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 RIT2Q99578 217 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 GCOM2Q9BZD3 368 aaPredicted RBP18.04■□□□□ 0.48
VCX3A-201ENST00000381089 CHST12Q9NRB3 414 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 SORCS3Q9UPU3 1222 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 HCFC2Q9Y5Z7 792 aa18.04■□□□□ 0.48
VCX3A-201ENST00000381089 C2orf71A6NGG8 1288 aa18.03■□□□□ 0.48
VCX3A-201ENST00000381089 SKIP12755 728 aa18.03■□□□□ 0.48
VCX3A-201ENST00000381089 DNM2P50570 870 aa18.03■□□□□ 0.48
VCX3A-201ENST00000381089 GIT2Q14161 759 aa18.03■□□□□ 0.48
VCX3A-201ENST00000381089 CLLU1OSQ5K130 101 aa18.03■□□□□ 0.48
VCX3A-201ENST00000381089 CCDC136Q96JN2 1154 aa18.03■□□□□ 0.48
VCX3A-201ENST00000381089 TEKT3Q9BXF9 490 aa18.03■□□□□ 0.48
VCX3A-201ENST00000381089 DZANK1Q9NVP4 752 aa18.03■□□□□ 0.48
VCX3A-201ENST00000381089 CHMP2AO43633 222 aa18.02■□□□□ 0.48
VCX3A-201ENST00000381089 GFRA3O60609 400 aa18.02■□□□□ 0.48
VCX3A-201ENST00000381089 CXCL14O95715 111 aa18.02■□□□□ 0.48
VCX3A-201ENST00000381089 SFPQP23246 707 aaKnown RBP eCLIP18.02■□□□□ 0.48
VCX3A-201ENST00000381089 USP11P51784 963 aa18.02■□□□□ 0.48
VCX3A-201ENST00000381089 BCAR1P56945 870 aa18.02■□□□□ 0.48
VCX3A-201ENST00000381089 LRCH2Q5VUJ6 765 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms