RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 KATNBL1Q9H079 304 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 SLC37A4O43826 429 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 LCA5LO95447 670 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 ATP2B1P20020 1258 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 EEF1GP26641 437 aaKnown RBP8.54□□□□□ -1.04
CDKL5-202ENST00000379996 HNRNPH3P31942 346 aaKnown RBP8.54□□□□□ -1.04
CDKL5-202ENST00000379996 NKX3-2P78367 333 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 LACTBP83111 547 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-202ENST00000379996 MAP2K1Q02750 393 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-202ENST00000379996 GPR153Q6NV75 609 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 NLRX1Q86UT6 975 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 SLC35F6Q8N357 371 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 EMID1Q96A84 441 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-202ENST00000379996 CHP1Q99653 195 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 MAGEF1Q9HAY2 307 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 VTA1Q9NP79 307 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 RMND1Q9NWS8 449 aa8.54□□□□□ -1.04
CDKL5-202ENST00000379996 FRMPD3Q5JV73 1810 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 TTC26A0AVF1 554 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 PSMD10O75832 226 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 TDP2O95551 362 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 NR3C2P08235 984 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 FBXO45P0C2W1 286 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 ITGB5P18084 799 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 CDK11BP21127 795 aaKnown RBP8.53□□□□□ -1.04
CDKL5-202ENST00000379996 CCT6AP40227 531 aaKnown RBP8.53□□□□□ -1.04
CDKL5-202ENST00000379996 FCGRTP55899 365 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 CDK17Q00537 523 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 SPAG1Q07617 926 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 BRD3Q15059 726 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 STXBP2Q15833 593 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 CALCRLQ16602 461 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 LETM2Q2VYF4 491 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 FIGNQ5HY92 759 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 FOXR2Q6PJQ5 311 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 TTC13Q8NBP0 860 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 MKNK1Q9BUB5 465 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 EFCC1Q9HA90 598 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 AGO4Q9HCK5 861 aaKnown RBP8.53□□□□□ -1.04
CDKL5-202ENST00000379996 PRM3Q9NNZ6 103 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 TAB2Q9NYJ8 693 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 VAV3Q9UKW4 847 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 ADORA2AP29274 412 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 RRAGBQ5VZM2 374 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 PAPD7Q5XG87 772 aaKnown RBP8.53□□□□□ -1.04
CDKL5-202ENST00000379996 KLHL10Q6JEL2 608 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 WDR93Q6P2C0 686 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 CYP26C1Q6V0L0 522 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 NSMFQ6X4W1 530 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 KIAA0895Q8NCT3 520 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 NEK9Q8TD19 979 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 APBA2Q99767 749 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 CUEDC2Q9H467 287 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 HOMER2Q9NSB8 354 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 TBC1D22BQ9NU19 505 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 CPA4Q9UI42 421 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 L1RE1Q9UN81 338 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 ARID2Q68CP9 1835 aa8.53□□□□□ -1.04
CDKL5-202ENST00000379996 A0A1W2PQJ5 194 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 MSH4O15457 936 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 RGS20O76081 388 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 CHMP4BP1P59074 171 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 TMCO3Q6UWJ1 677 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 IL31RAQ8NI17 732 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 MARVELD3Q96A59 401 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 MAML3Q96JK9 1138 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 RAB34Q9BZG1 259 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 WDR11Q9BZH6 1224 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 TRIM9Q9C026 710 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 LZTFL1Q9NQ48 299 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 TRIM10Q9UDY6 481 aa8.52□□□□□ -1.04
CDKL5-202ENST00000379996 ZNF263O14978 683 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 DHX15O43143 795 aaKnown RBP8.52□□□□□ -1.05
CDKL5-202ENST00000379996 NDUFA10O95299 355 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 RGS2P41220 211 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 TAGLNQ01995 201 aaKnown RBP8.52□□□□□ -1.05
CDKL5-202ENST00000379996 LONRF2Q1L5Z9 754 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 GNPTABQ3T906 1256 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 CRTC2Q53ET0 693 aaPredicted RBP8.52□□□□□ -1.05
CDKL5-202ENST00000379996 DTHD1Q6ZMT9 781 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 DNAJC5GQ8N7S2 189 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 R3HDMLQ9H3Y0 253 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 BLOC1S4Q9NUP1 217 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 PSD3Q9NYI0 1048 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 TULP2O00295 520 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 WHAMMP3Q1A5X7 153 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 MNS1Q8NEH6 495 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 ERGIC2Q96RQ1 377 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 SIK3Q9Y2K2 1263 aa8.52□□□□□ -1.05
CDKL5-202ENST00000379996 ATG7O95352 703 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 C7P10643 843 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 KCNA2P16389 499 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 CTGFP29279 349 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 TMEM266Q2M3C6 531 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 OTOP1Q7RTM1 612 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 PPFIBP1Q86W92 1011 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 DHTKD1Q96HY7 919 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-202ENST00000379996 PNMA5Q96PV4 448 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 NUDT12Q9BQG2 462 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 POLR3CQ9BUI4 534 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms