RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 GSTT2BP0CG30 244 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 CHN1P15882 459 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 PORP16435 677 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 RASA1P20936 1047 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 NEK2P51955 445 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 ADARP55265 1226 aaKnown RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 RTP1P59025 263 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 BCL2A1Q16548 175 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 LIN52Q52LA3 116 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 GRAMD4Q6IC98 578 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 KLC3Q6P597 504 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 WDR59Q6PJI9 974 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 ANKK1Q8NFD2 765 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 UHMK1Q8TAS1 419 aaKnown RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 NELFBQ8WX92 580 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 DUSP9Q99956 384 aaKnown RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 DDX50Q9BQ39 737 aaKnown RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 GJB4Q9NTQ9 266 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 KCNH3Q9ULD8 1083 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 ZNF711Q9Y462 761 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 SH2B2O14492 632 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 SNX3O60493 162 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 BBOX1O75936 387 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 CCNB1P14635 433 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 PLCG2P16885 1265 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 HALP42357 657 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 PHKA1P46020 1223 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 KRT83P78385 493 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 RASGRF1Q13972 1273 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 PHLDB3Q6NSJ2 640 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 STOX1Q6ZVD7 989 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 ZC3H18Q86VM9 953 aaKnown RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 IFNL3Q8IZI9 196 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 NACC2Q96BF6 587 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 HAUS1Q96CS2 278 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 C8orf37Q96NL8 207 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 MIS12Q9H081 205 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 CD2APQ9Y5K6 639 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 MROH7Q68CQ1 1323 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 MYPNQ86TC9 1320 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 CACNA1SQ13698 1873 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 CPLX1O14810 134 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 SART1O43290 800 aaKnown RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 TIMM44O43615 452 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 ECHS1P30084 290 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 SH3BGRP55822 239 aaPredicted RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 CDK17Q00537 523 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 TRIM14Q14142 442 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 DIXDC1Q155Q3 683 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 SPATA24Q86W54 205 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 PDCD7Q8N8D1 485 aaKnown RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 RETREG2Q8NC44 543 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 IQCDQ96DY2 449 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 EDC3Q96F86 508 aaKnown RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 CRAMP1Q96RY5 1269 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 PIH1D3Q9NQM4 214 aaKnown RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 GPHNQ9NQX3 736 aaPredicted RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 ARPP21Q9UBL0 812 aaPredicted RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 TBC1D30Q9Y2I9 924 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 DYTNA2CJ06 578 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 KLRG2A4D1S0 409 aaPredicted RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 A6NJR5 290 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 CD44P16070 742 aaKnown RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 TCP1P17987 556 aaKnown RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 ATP2B4P23634 1241 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 GALK1P51570 392 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 GRAPQ13588 217 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 PTPAQ15257 358 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 KLHL10Q6JEL2 608 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 MFSD6Q6ZSS7 791 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 GRAMD1CQ8IYS0 662 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 FITM2Q8N6M3 262 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 GRAPLQ8TC17 118 aaPredicted RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 IRGQQ8WZA9 623 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 ESR2Q92731 530 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 TLCD1Q96CP7 247 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 DNAJC1Q96KC8 554 aaKnown RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 PUS7LQ9H0K6 701 aaKnown RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 PNMA2Q9UL42 364 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 MINPP1Q9UNW1 487 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 ZNF148Q9UQR1 794 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 TDRKHQ9Y2W6 561 aaKnown RBP8.07□□□□□ -1.12
CDKL5-201ENST00000379989 HYOU1Q9Y4L1 999 aa8.07□□□□□ -1.12
CDKL5-201ENST00000379989 TTC26A0AVF1 554 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 PPP6R2O75170 966 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 IDH1O75874 414 aaKnown RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 ASMTLO95671 621 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 UBTFL6P0CB48 400 aaPredicted RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 SKIP12755 728 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 RXRBP28702 533 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 RFC4P35249 363 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 FLT3P36888 993 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 ARPC4P59998 168 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 CRY2Q49AN0 593 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 FAAH2Q6GMR7 532 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 PEX5LQ8IYB4 626 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 TTC8Q8TAM2 541 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 NAT14Q8WUY8 206 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 BHMTQ93088 406 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 MPP4Q96JB8 637 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms