RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 ZSCAN12O43309 604 aa13.75□□□□□ -0.21
VRK3-202ENST00000377011 CYP3A7P24462 503 aa13.75□□□□□ -0.21
VRK3-202ENST00000377011 PBX2P40425 430 aa13.75□□□□□ -0.21
VRK3-202ENST00000377011 USP11P51784 963 aa13.75□□□□□ -0.21
VRK3-202ENST00000377011 IGBP1P78318 339 aa13.75□□□□□ -0.21
VRK3-202ENST00000377011 MORC3Q14149 939 aa13.75□□□□□ -0.21
VRK3-202ENST00000377011 NONOQ15233 471 aaKnown RBP eCLIP13.75□□□□□ -0.21
VRK3-202ENST00000377011 TMCO2Q7Z6W1 182 aaPredicted RBP13.75□□□□□ -0.21
VRK3-202ENST00000377011 SLC5A5Q92911 643 aa13.75□□□□□ -0.21
VRK3-202ENST00000377011 SMARCE1Q969G3 411 aa13.75□□□□□ -0.21
VRK3-202ENST00000377011 RNPC3Q96LT9 517 aaKnown RBP13.75□□□□□ -0.21
VRK3-202ENST00000377011 SEZ6LQ9BYH1 1024 aa13.75□□□□□ -0.21
VRK3-202ENST00000377011 MAN1B1Q9UKM7 699 aa13.75□□□□□ -0.21
VRK3-202ENST00000377011 ZNF215Q9UL58 517 aaPredicted RBP13.75□□□□□ -0.21
VRK3-202ENST00000377011 SPTBN5Q9NRC6 3674 aaKnown RBP13.74□□□□□ -0.21
VRK3-202ENST00000377011 EMSYQ7Z589 1322 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 TMEM150BA6NC51 233 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 ZBTB42B2RXF5 422 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 CHMP2AO43633 222 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 CTSHP09668 335 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 ATP1A3P13637 1013 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 INSRRP14616 1297 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 ZNF18P17022 549 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 ETF1P62495 437 aaKnown RBP13.74□□□□□ -0.21
VRK3-202ENST00000377011 TBX2Q13207 712 aaPredicted RBP13.74□□□□□ -0.21
VRK3-202ENST00000377011 PTK7Q13308 1070 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 PPIGQ13427 754 aaKnown RBP eCLIP13.74□□□□□ -0.212e-6■■■■□ 20.1
VRK3-202ENST00000377011 Q4G0T1 1027 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 GALNT17Q6IS24 598 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 SWSAP1Q6NVH7 229 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 HAS1Q92839 578 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 MYH9P35579 1960 aaKnown RBP13.74□□□□□ -0.21
VRK3-202ENST00000377011 UNC80Q8N2C7 3258 aa13.74□□□□□ -0.21
VRK3-202ENST00000377011 EVPLQ92817 2033 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 EML1O00423 815 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 PITPNM1O00562 1244 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 ZNF862O60290 1169 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 PSMD10O75832 226 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 KRT2P35908 639 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 STAT5BP51692 787 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 GRIK4Q16099 956 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 B3GNT9Q6UX72 402 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 LRRC8DQ7L1W4 858 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 KRT25Q7Z3Z0 450 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 PYM1Q9BRP8 204 aaKnown RBP13.73□□□□□ -0.21
VRK3-202ENST00000377011 ERAP1Q9NZ08 941 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 TRANK1O15050 2925 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 LOXHD1Q8IVV2 1947 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 A0A0C4DFX4 3053 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 CCDC194A0A1B0GVG4 234 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 ACTN4O43707 911 aaKnown RBP13.73□□□□□ -0.21
VRK3-202ENST00000377011 THPOP40225 353 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 SETQ01105 290 aaPredicted RBP13.73□□□□□ -0.21
VRK3-202ENST00000377011 RBL2Q08999 1139 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 PPFIA1Q13136 1202 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 MCTP2Q6DN12 878 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 NEK8Q86SG6 692 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 FAM161BQ96MY7 647 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 SH2D3AQ9BRG2 576 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 SMARCAD1Q9H4L7 1026 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 BRMS1Q9HCU9 246 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 FANCLQ9NW38 375 aa13.73□□□□□ -0.21
VRK3-202ENST00000377011 DDX25Q9UHL0 483 aaKnown RBP13.73□□□□□ -0.21
VRK3-202ENST00000377011 STX10O60499 249 aa13.72□□□□□ -0.21
VRK3-202ENST00000377011 CCNT1O60563 726 aaKnown RBP13.72□□□□□ -0.21
VRK3-202ENST00000377011 MYOGP15173 224 aa13.72□□□□□ -0.21
VRK3-202ENST00000377011 SELPP16109 830 aa13.72□□□□□ -0.21
VRK3-202ENST00000377011 BMP6P22004 513 aa13.72□□□□□ -0.21
VRK3-202ENST00000377011 RABGGTBP53611 331 aa13.72□□□□□ -0.21
VRK3-202ENST00000377011 LRCH2Q5VUJ6 765 aa13.72□□□□□ -0.21
VRK3-202ENST00000377011 CREBRFQ8IUR6 639 aa13.72□□□□□ -0.21
VRK3-202ENST00000377011 HERVK_113Q902F9 699 aa13.72□□□□□ -0.21
VRK3-202ENST00000377011 KCNMB3Q9NPA1 279 aa13.72□□□□□ -0.21
VRK3-202ENST00000377011 WRAP73Q9P2S5 460 aaPredicted RBP13.72□□□□□ -0.21
VRK3-202ENST00000377011 GABBR1Q9UBS5 961 aa13.72□□□□□ -0.21
VRK3-202ENST00000377011 VAV3Q9UKW4 847 aa13.72□□□□□ -0.21
VRK3-202ENST00000377011 MBLAC1A4D2B0 266 aaPredicted RBP13.71□□□□□ -0.21
VRK3-202ENST00000377011 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 BACH1O14867 736 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 POLR2DO15514 142 aaKnown RBP13.71□□□□□ -0.21
VRK3-202ENST00000377011 STBD1O95210 358 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 FGBP02675 491 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 CHRNA1P02708 482 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 TMEM62Q0P6H9 643 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 BFSP2Q13515 415 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 SPECC1LQ69YQ0 1117 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 ZNF746Q6NUN9 644 aaPredicted RBP13.71□□□□□ -0.21
VRK3-202ENST00000377011 PLPPR4Q7Z2D5 763 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 CAGE1Q8TC20 777 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 AFAP1L1Q8TED9 768 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 DNAJB3Q8WWF6 145 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 TMEM60Q9H2L4 133 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 TTYH1Q9H313 450 aaPredicted RBP13.71□□□□□ -0.21
VRK3-202ENST00000377011 ZNF302Q9NR11 478 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 TBC1D22BQ9NU19 505 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 SERTAD1Q9UHV2 236 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 PCDHB6Q9Y5E3 794 aa13.71□□□□□ -0.21
VRK3-202ENST00000377011 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms