RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 HCFC2Q9Y5Z7 792 aa14.88□□□□□ -0.03
CLCN6-205ENST00000376492 PLXNA3P51805 1871 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 ZBTB43O43298 467 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 FOSP01100 380 aaPredicted RBP14.87□□□□□ -0.03
CLCN6-205ENST00000376492 ASGR2P07307 311 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 PPM1AP35813 382 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 ZNF76P36508 570 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 FUT2Q10981 343 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 MTMR3Q13615 1198 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 CLLU1OSQ5K130 101 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 PPP1R18Q6NYC8 613 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 Q6ZUG5 572 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 RUFY3Q7L099 469 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 PLA2G4DQ86XP0 818 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 RNF169Q8NCN4 708 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 CASP10Q92851 521 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 IRF2BPLQ9H1B7 796 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 ADAM7Q9H2U9 754 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 RBM28Q9NW13 759 aaKnown RBP14.87□□□□□ -0.03
CLCN6-205ENST00000376492 SORCS3Q9UPU3 1222 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 NR2E1Q9Y466 385 aa14.87□□□□□ -0.03
CLCN6-205ENST00000376492 IGLV3-22A0A075B6J6 115 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 KLF18A0A0U1RQI7 1052 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 SMCO2A6NFE2 343 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 C2orf71A6NGG8 1288 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 PROB1E7EW31 1015 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 IPO5O00410 1097 aaKnown RBP14.86□□□□□ -0.03
CLCN6-205ENST00000376492 ADAMTS3O15072 1205 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 CLK2P49760 499 aaKnown RBP14.86□□□□□ -0.03
CLCN6-205ENST00000376492 FGD1P98174 961 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 KRT17Q04695 432 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 AP3B2Q13367 1082 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 SMC1AQ14683 1233 aaKnown RBP14.86□□□□□ -0.03
CLCN6-205ENST00000376492 TPRNQ4KMQ1 711 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 KANK3Q6NY19 840 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 FAM43BQ6ZT52 329 aaPredicted RBP14.86□□□□□ -0.03
CLCN6-205ENST00000376492 NIPA1Q7RTP0 329 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 ECHDC2Q86YB7 292 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 ABI1Q8IZP0 508 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 SLC39A11Q8N1S5 342 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 LRRC71Q8N4P6 559 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 C12orf76Q8N812 135 aaPredicted RBP14.86□□□□□ -0.03
CLCN6-205ENST00000376492 MRPL43Q8N983 215 aaKnown RBP14.86□□□□□ -0.03
CLCN6-205ENST00000376492 FEZF2Q8TBJ5 459 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 BBXQ8WY36 941 aaPredicted RBP14.86□□□□□ -0.03
CLCN6-205ENST00000376492 SPG21Q9NZD8 308 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 AKT3Q9Y243 479 aa14.86□□□□□ -0.03
CLCN6-205ENST00000376492 MAFBQ9Y5Q3 323 aaPredicted RBP14.86□□□□□ -0.03
CLCN6-205ENST00000376492 V9GY48 417 aaPredicted RBP14.86□□□□□ -0.03
CLCN6-205ENST00000376492 VPS13AQ96RL7 3174 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 PRR23AA6NEV1 266 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 HOXA2O43364 376 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 CLASP2O75122 1294 aaKnown RBP14.85□□□□□ -0.03
CLCN6-205ENST00000376492 FGFR4P22455 802 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 CA8P35219 290 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 NUBP1P53384 320 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 EVCP57679 992 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 NLRP11P59045 1033 aaKnown RBP14.85□□□□□ -0.03
CLCN6-205ENST00000376492 RTN1Q16799 776 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 C8orf34Q49A92 452 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 RARS2Q5T160 578 aaKnown RBP14.85□□□□□ -0.03
CLCN6-205ENST00000376492 JAKMIP3Q5VZ66 844 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 CES5AQ6NT32 575 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 UBALD2Q8IYN6 164 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 HELQQ8TDG4 1101 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 BRF1Q92994 677 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 ZNF577Q9BSK1 485 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 ADAMTS10Q9H324 1103 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 FAM217BQ9NTX9 383 aaPredicted RBP14.85□□□□□ -0.03
CLCN6-205ENST00000376492 BARHL2Q9NY43 387 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 CYP46A1Q9Y6A2 500 aa14.85□□□□□ -0.03
CLCN6-205ENST00000376492 SPTBN4Q9H254 2564 aa14.84□□□□□ -0.03
CLCN6-205ENST00000376492 NT5C1B-RDH14C9J2C7 533 aa14.84□□□□□ -0.03
CLCN6-205ENST00000376492 METAP2P50579 478 aaKnown RBP eCLIP14.84□□□□□ -0.03
CLCN6-205ENST00000376492 ANAPC15P60006 121 aa14.84□□□□□ -0.03
CLCN6-205ENST00000376492 ITIH3Q06033 890 aa14.84□□□□□ -0.03
CLCN6-205ENST00000376492 TMEM173Q86WV6 379 aaPredicted RBP14.84□□□□□ -0.03
CLCN6-205ENST00000376492 LINC01465Q8N7H1 131 aa14.84□□□□□ -0.03
CLCN6-205ENST00000376492 CRYGNQ8WXF5 182 aa14.84□□□□□ -0.03
CLCN6-205ENST00000376492 AUTS2Q8WXX7 1259 aa14.84□□□□□ -0.03
CLCN6-205ENST00000376492 NECTIN4Q96NY8 510 aa14.84□□□□□ -0.03
CLCN6-205ENST00000376492 GABBR1Q9UBS5 961 aa14.84□□□□□ -0.03
CLCN6-205ENST00000376492 LIMD1Q9UGP4 676 aa14.84□□□□□ -0.03
CLCN6-205ENST00000376492 PTPRZ1P23471 2315 aaPredicted RBP14.84□□□□□ -0.03
CLCN6-205ENST00000376492 ZSCAN20P17040 1043 aaPredicted RBP14.83□□□□□ -0.04
CLCN6-205ENST00000376492 EIF4BP23588 611 aaKnown RBP14.83□□□□□ -0.04
CLCN6-205ENST00000376492 NBL1P41271 181 aa14.83□□□□□ -0.04
CLCN6-205ENST00000376492 ZNF746Q6NUN9 644 aaPredicted RBP14.83□□□□□ -0.04
CLCN6-205ENST00000376492 EFCAB12Q6NXP0 572 aa14.83□□□□□ -0.04
CLCN6-205ENST00000376492 FRMD5Q7Z6J6 570 aa14.83□□□□□ -0.04
CLCN6-205ENST00000376492 ZNF598Q86UK7 904 aaKnown RBP14.83□□□□□ -0.04
CLCN6-205ENST00000376492 TDRD5Q8NAT2 981 aaKnown RBP14.83□□□□□ -0.04
CLCN6-205ENST00000376492 MAP7D2Q96T17 732 aa14.83□□□□□ -0.04
CLCN6-205ENST00000376492 DCHS1Q96JQ0 3298 aa14.82□□□□□ -0.04
CLCN6-205ENST00000376492 RIF1Q5UIP0 2472 aaKnown RBP14.82□□□□□ -0.04
CLCN6-205ENST00000376492 CCDC196A0A1B0GTZ2 297 aa14.82□□□□□ -0.04
CLCN6-205ENST00000376492 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.82□□□□□ -0.04
CLCN6-205ENST00000376492 GOLGA8AA7E2F4 631 aa14.82□□□□□ -0.04
CLCN6-205ENST00000376492 GOLGA8BA8MQT2 603 aa14.82□□□□□ -0.04
CLCN6-205ENST00000376492 hCG_1984214I3L0E3 225 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms