RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 DUX4L3P0CJ86 424 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 DUX4L4P0CJ87 422 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 DUX4L5P0CJ88 424 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 DUX4L6P0CJ89 424 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 DUX4L7P0CJ90 424 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 PDE6CP51160 858 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 SBK1Q52WX2 424 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 GPATCH4Q5T3I0 446 aaKnown RBP7.07□□□□□ -1.28
CHD6-203ENST00000373233 ICA1LQ8NDH6 482 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 KIFC2Q96AC6 838 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 KIFC3Q9BVG8 833 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 ETNK1Q9HBU6 452 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 DUX4Q9UBX2 424 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 PCDHA1Q9Y5I3 950 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 MAST2Q6P0Q8 1798 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 PNMA6FA0A0J9YX94 578 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 SYDE2Q5VT97 1194 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 PPP4R3AQ6IN85 833 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 SV2BQ7L1I2 683 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 CEP19Q96LK0 163 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 EFHD1Q9BUP0 239 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 SENP2Q9HC62 589 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 OLFML3Q9NRN5 406 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 R3HDM2Q9Y2K5 976 aaKnown RBP7.07□□□□□ -1.28
CHD6-203ENST00000373233 APOA1P02647 267 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 KRT9P35527 623 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 C2orf54Q08AI8 447 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 KAZNQ674X7 775 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 SARM1Q6SZW1 724 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 CDH24Q86UP0 819 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 MYH7BA7E2Y1 1941 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 PPP6R2O75170 966 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 RCN1Q15293 331 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 VSTM4Q8IW00 320 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 RNF169Q8NCN4 708 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 PARD3BQ8TEW8 1205 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 GORASP1Q9BQQ3 440 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 PSD3Q9NYI0 1048 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 DUOX1Q9NRD9 1551 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 ZBED4O75132 1171 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 PRR29P0C7W0 189 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 USP17L2Q6R6M4 530 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 BPIFA3Q9BQP9 254 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 DDX25Q9UHL0 483 aaKnown RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 STK24Q9Y6E0 443 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 SFI1A8K8P3 1242 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 FAM13AO94988 1023 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 PPP1R2P41236 205 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 HDAC4P56524 1084 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 SPICE1Q8N0Z3 855 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 SYMPKQ92797 1274 aaKnown RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 TUBB6Q9BUF5 446 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 NOD2Q9HC29 1040 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 IKBKBO14920 756 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 MAP4P27816 1152 aaKnown RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 TXKP42681 527 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 BTKQ06187 659 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 PFKFB3Q16875 520 aaPredicted RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 MSL3Q8N5Y2 521 aaKnown RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 CCPG1Q9ULG6 757 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 BRWD3Q6RI45 1802 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 KCNJ18B7U540 433 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 SMAPO00193 183 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 P4HA2O15460 535 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 AHCYL1O43865 530 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 PTGDRQ13258 359 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 KCNJ12Q14500 433 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 BZW1Q7L1Q6 419 aaKnown RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 LINC00301Q8NCQ3 95 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 RASGRP4Q8TDF6 673 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 DNAJC17Q9NVM6 304 aaKnown RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 SERTAD1Q9UHV2 236 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 CICQ96RK0 1608 aaPredicted RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 RSPH10B2B2RC85 870 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 KIF28PB7ZC32 967 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 RSPH10BP0C881 870 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 UBTFL6P0CB48 400 aaPredicted RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 NEK8Q86SG6 692 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 PALM2Q8IXS6 379 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 HAUS4Q9H6D7 363 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 TARSL2A2RTX5 802 aaKnown RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 SLC16A2P36021 539 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 SMTNP53814 917 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 AP2B1P63010 937 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 HDLBPQ00341 1268 aaKnown RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 CNNM4Q6P4Q7 775 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 POTEEQ6S8J3 1075 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 FBXO11Q86XK2 927 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 FAM186BQ8IYM0 893 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 OXER1Q8TDS5 423 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 MMADHCQ9H3L0 296 aaPredicted RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 GJB4Q9NTQ9 266 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 PCDHB6Q9Y5E3 794 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 RHOBTB1O94844 696 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 DPEP1P16444 411 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 CDC37Q16543 378 aaPredicted RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 STRIP1Q5VSL9 837 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 RESP18Q5W5W9 173 aa7.06□□□□□ -1.28
CHD6-203ENST00000373233 CCDC84Q86UT8 332 aaPredicted RBP7.06□□□□□ -1.28
CHD6-203ENST00000373233 SLC35F6Q8N357 371 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms