RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 IPO7O95373 1038 aaKnown RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 FAM228BP0C875 321 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 SPATA31C1P0DKV0 1188 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 SLC9A1P19634 815 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 GNALP38405 381 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 KLRC3Q07444 240 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 SPA17Q15506 151 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 ZYXQ15942 572 aaKnown RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 AOC3Q16853 763 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 ASTE1Q2TB18 679 aaPredicted RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 CERKLQ49MI3 558 aaPredicted RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 FAM83BQ5T0W9 1011 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 PDXDC1Q6P996 788 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 CCDC170Q8IYT3 715 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 PIGOQ8TEQ8 1089 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 REEP2Q9BRK0 252 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 NUP58Q9BVL2 599 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 TLR10Q9BXR5 811 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 KCTD10Q9H3F6 313 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 KCNMB3Q9NPA1 279 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 CHST12Q9NRB3 414 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 VTI1BQ9UEU0 232 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 SWAP70Q9UH65 585 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 ADAMTS1Q9UHI8 967 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 SNX12Q9UMY4 172 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 CLIC2O15247 247 aa7□□□□□ -1.29
CHD6-202ENST00000373222 CHMP2AO43633 222 aa7□□□□□ -1.29
CHD6-202ENST00000373222 NDUFB10O96000 172 aa7□□□□□ -1.29
CHD6-202ENST00000373222 GH2P01242 217 aa7□□□□□ -1.29
CHD6-202ENST00000373222 KLRC1P26715 233 aa7□□□□□ -1.29
CHD6-202ENST00000373222 HNRNPH3P31942 346 aaKnown RBP7□□□□□ -1.29
CHD6-202ENST00000373222 MAGEA1P43355 309 aa7□□□□□ -1.29
CHD6-202ENST00000373222 MRPL12P52815 198 aaKnown RBP7□□□□□ -1.29
CHD6-202ENST00000373222 SLC12A3P55017 1021 aa7□□□□□ -1.29
CHD6-202ENST00000373222 NAP1L1P55209 391 aaKnown RBP7□□□□□ -1.29
CHD6-202ENST00000373222 ICA1Q05084 483 aa7□□□□□ -1.29
CHD6-202ENST00000373222 LRRC63Q05C16 580 aa7□□□□□ -1.29
CHD6-202ENST00000373222 RAPGEF1Q13905 1077 aa7□□□□□ -1.29
CHD6-202ENST00000373222 CAPN12Q6ZSI9 719 aa7□□□□□ -1.29
CHD6-202ENST00000373222 SFR1Q86XK3 245 aa7□□□□□ -1.29
CHD6-202ENST00000373222 ETNPPLQ8TBG4 499 aa7□□□□□ -1.29
CHD6-202ENST00000373222 OSBPL9Q96SU4 736 aa7□□□□□ -1.29
CHD6-202ENST00000373222 RUSC1Q9BVN2 902 aa7□□□□□ -1.29
CHD6-202ENST00000373222 EHD4Q9H223 541 aa7□□□□□ -1.29
CHD6-202ENST00000373222 RBM12Q9NTZ6 932 aaKnown RBP7□□□□□ -1.29
CHD6-202ENST00000373222 TYW1Q9NV66 732 aaKnown RBP7□□□□□ -1.29
CHD6-202ENST00000373222 CXXC1Q9P0U4 656 aaPredicted RBP7□□□□□ -1.29
CHD6-202ENST00000373222 HPCAL4Q9UM19 191 aa7□□□□□ -1.29
CHD6-202ENST00000373222 ATAD5Q96QE3 1844 aa7□□□□□ -1.29
CHD6-202ENST00000373222 CLRN2A0PK11 232 aa7□□□□□ -1.29
CHD6-202ENST00000373222 AGPSO00116 658 aa7□□□□□ -1.29
CHD6-202ENST00000373222 KRT18P05783 430 aaKnown RBP7□□□□□ -1.29
CHD6-202ENST00000373222 HLA-DOAP06340 250 aa7□□□□□ -1.29
CHD6-202ENST00000373222 GGCXP38435 758 aa7□□□□□ -1.29
CHD6-202ENST00000373222 DAB2P98082 770 aa7□□□□□ -1.29
CHD6-202ENST00000373222 FKBP3Q00688 224 aaKnown RBP7□□□□□ -1.29
CHD6-202ENST00000373222 ADAM9Q13443 819 aa7□□□□□ -1.29
CHD6-202ENST00000373222 COG2Q14746 738 aa7□□□□□ -1.29
CHD6-202ENST00000373222 TBC1D10BQ4KMP7 808 aaPredicted RBP7□□□□□ -1.29
CHD6-202ENST00000373222 COBLL1Q53SF7 1204 aa7□□□□□ -1.29
CHD6-202ENST00000373222 FIGNQ5HY92 759 aa7□□□□□ -1.29
CHD6-202ENST00000373222 GPATCH4Q5T3I0 446 aaKnown RBP7□□□□□ -1.29
CHD6-202ENST00000373222 KLHDC7AQ5VTJ3 777 aa7□□□□□ -1.29
CHD6-202ENST00000373222 WDR93Q6P2C0 686 aa7□□□□□ -1.29
CHD6-202ENST00000373222 TRMT1LQ7Z2T5 733 aaKnown RBP7□□□□□ -1.29
CHD6-202ENST00000373222 ACER1Q8TDN7 264 aa7□□□□□ -1.29
CHD6-202ENST00000373222 PRMT6Q96LA8 375 aaPredicted RBP7□□□□□ -1.29
CHD6-202ENST00000373222 SH2D3AQ9BRG2 576 aa7□□□□□ -1.29
CHD6-202ENST00000373222 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7□□□□□ -1.29
CHD6-202ENST00000373222 SELENOOQ9BVL4 669 aa7□□□□□ -1.29
CHD6-202ENST00000373222 RAB34Q9BZG1 259 aa7□□□□□ -1.29
CHD6-202ENST00000373222 BHMT2Q9H2M3 363 aa7□□□□□ -1.29
CHD6-202ENST00000373222 FAM204AQ9H8W3 233 aa7□□□□□ -1.29
CHD6-202ENST00000373222 RBBP6Q7Z6E9 1792 aaKnown RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 MSH4O15457 936 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 TREHO43280 583 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 ECE2O60344 883 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 RNF40O75150 1001 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 LRRN2O75325 713 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 ERLIN1O75477 346 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 PALMO75781 387 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 NR2F2P24468 414 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 KCNH2Q12809 1159 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 DGKZQ13574 1117 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 GIT2Q14161 759 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 CTTNQ14247 550 aaKnown RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 NR6A1Q15406 480 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 ZC2HC1CQ53FD0 456 aaPredicted RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 DCAF17Q5H9S7 520 aaPredicted RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 DACT2Q5SW24 774 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 TTC19Q6DKK2 380 aaPredicted RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 ZNF280DQ6N043 979 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 KRT27Q7Z3Y8 459 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 TRIM59Q8IWR1 403 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 TSEN2Q8NCE0 465 aaKnown RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 SPATA4Q8NEY3 305 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 CRYGNQ8WXF5 182 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 FRMD6Q96NE9 622 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 EPAS1Q99814 870 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 PDGFDQ9GZP0 370 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms