RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 SLC10A5Q5PT55 438 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 ZBED2Q9BTP6 218 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 ZNF341Q9BYN7 854 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 GPC3P51654 580 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 CLCN6P51797 869 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 MORF4L2Q15014 288 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 MAPK6Q16659 721 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 DALRD3Q5D0E6 543 aaKnown RBP12.31□□□□□ -0.44
VCL-202ENST00000372755 RESP18Q5W5W9 173 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 MIGA2Q7L4E1 593 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 SZRD1Q7Z422 152 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 TTC39CQ8N584 583 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 TBC1D22BQ9NU19 505 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 PLEKHG1Q9ULL1 1385 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 ASNSP08243 561 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 PPP1R18Q6NYC8 613 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 XXYLT1Q8NBI6 393 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 OR9Q1Q8NGQ5 310 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 CYTH2Q99418 400 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 ELAC2Q9BQ52 826 aaKnown RBP12.31□□□□□ -0.44
VCL-202ENST00000372755 ING2Q9H160 280 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 DNAJC17Q9NVM6 304 aaKnown RBP12.31□□□□□ -0.44
VCL-202ENST00000372755 BSDC1Q9NW68 430 aaPredicted RBP12.31□□□□□ -0.44
VCL-202ENST00000372755 SUGT1Q9Y2Z0 365 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 RASA4BC9J798 803 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 RASA4O43374 803 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 PALMO75781 387 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 TBXAS1P24557 533 aaPredicted RBP12.31□□□□□ -0.44
VCL-202ENST00000372755 NNMTP40261 264 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 FBXW4P57775 412 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 MTMR1Q13613 665 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 TTC23LQ6PF05 361 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 TRPV6Q9H1D0 765 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 PCDHA6Q9UN73 950 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 PCDHA8Q9Y5H6 950 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 FAM95CA0A1B0GW59 222 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 FLOT2Q14254 428 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 MXD4Q14582 209 aaPredicted RBP12.31□□□□□ -0.44
VCL-202ENST00000372755 TMEM259Q4ZIN3 620 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 BANK1Q8NDB2 785 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 FTOQ9C0B1 505 aaKnown RBP eCLIP12.31□□□□□ -0.44
VCL-202ENST00000372755 STX18Q9P2W9 335 aaKnown RBP12.31□□□□□ -0.44
VCL-202ENST00000372755 ZFP69BQ9UJL9 534 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 FEM1BQ9UK73 627 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 STAP1Q9ULZ2 295 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 UBE4BO95155 1302 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 CFAP43Q8NDM7 1665 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 PI4K2BG5E9Z4 385 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 ZNF772Q68DY9 489 aaPredicted RBP12.31□□□□□ -0.44
VCL-202ENST00000372755 ITPRIPL1Q6GPH6 555 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 EPM2AIP1Q7L775 607 aaPredicted RBP12.31□□□□□ -0.44
VCL-202ENST00000372755 TBC1D1Q86TI0 1168 aaPredicted RBP12.31□□□□□ -0.44
VCL-202ENST00000372755 URGCPQ8TCY9 931 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 COG4Q9H9E3 785 aa12.31□□□□□ -0.44
VCL-202ENST00000372755 DPYSL4O14531 572 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 DMTNQ08495 405 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 ZC3H12BQ5HYM0 836 aaKnown RBP12.3□□□□□ -0.44
VCL-202ENST00000372755 SLC27A3Q5K4L6 730 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 ASPSCR1Q9BZE9 553 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 UBN2Q6ZU65 1347 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 NFX1Q12986 1120 aaKnown RBP12.3□□□□□ -0.44
VCL-202ENST00000372755 NAALADL2Q58DX5 795 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 N4BP2L2Q92802 583 aaPredicted RBP12.3□□□□□ -0.44
VCL-202ENST00000372755 C2orf40Q9H1Z8 148 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 VPS11Q9H270 941 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 EFCAB14O75071 495 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 NR3C1P04150 777 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 MYBL1P10243 752 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 LRRC23Q53EV4 343 aaPredicted RBP12.3□□□□□ -0.44
VCL-202ENST00000372755 GAS2L3Q86XJ1 694 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 HOXC10Q9NYD6 342 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 SNX24Q9Y343 169 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 ANO9A1A5B4 782 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 ZBTB5O15062 677 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 MYO1DO94832 1006 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 SDC4P31431 198 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 KRT76Q01546 638 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 ORC2Q13416 577 aaPredicted RBP12.3□□□□□ -0.44
VCL-202ENST00000372755 NAF1Q96HR8 494 aaKnown RBP12.3□□□□□ -0.44
VCL-202ENST00000372755 NDE1Q9NXR1 346 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 ABT1Q9ULW3 272 aaKnown RBP12.3□□□□□ -0.44
VCL-202ENST00000372755 GTPBP10A4D1E9 387 aaKnown RBP12.3□□□□□ -0.44
VCL-202ENST00000372755 DDX5P17844 614 aaKnown RBP12.3□□□□□ -0.44
VCL-202ENST00000372755 PIH1D3Q9NQM4 214 aaKnown RBP12.3□□□□□ -0.44
VCL-202ENST00000372755 KIF17Q9P2E2 1029 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 WARS2Q9UGM6 360 aaKnown RBP12.3□□□□□ -0.44
VCL-202ENST00000372755 POLIQ9UNA4 740 aa12.3□□□□□ -0.44
VCL-202ENST00000372755 ADGRL2O95490 1459 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 E5RI56 91 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 ASAP2O43150 1006 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 CREB3O43889 395 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 AARSP49588 968 aaKnown RBP eCLIP12.29□□□□□ -0.446e-7■■■■■ 85.6
VCL-202ENST00000372755 FOXD4Q12950 439 aaPredicted RBP12.29□□□□□ -0.44
VCL-202ENST00000372755 HIPK4Q8NE63 616 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 SLC26A7Q8TE54 656 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 RAD54LQ92698 747 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 BTBD6Q96KE9 485 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 PLEKHF1Q96S99 279 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 DDX56Q9NY93 547 aaKnown RBP12.29□□□□□ -0.44
VCL-202ENST00000372755 NEMP1O14524 444 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms