RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TRPC5Q9UL62 973 aaPredicted RBP16.07■□□□□ 0.16
COL9A2-202ENST00000372748 SNX24Q9Y343 169 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 PPFIA2O75334 1257 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 DNAJC8O75937 253 aaPredicted RBP16.06■□□□□ 0.16
COL9A2-202ENST00000372748 SNHG28P0DPA3 235 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 XRCC5P13010 732 aaKnown RBP16.06■□□□□ 0.16
COL9A2-202ENST00000372748 POU5F1Q01860 360 aaKnown RBP16.06■□□□□ 0.16
COL9A2-202ENST00000372748 DCAF12L1Q5VU92 463 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 SLFN11Q7Z7L1 901 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 STAMBPL1Q96FJ0 436 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 PRMT1Q99873 361 aaKnown RBP16.06■□□□□ 0.16
COL9A2-202ENST00000372748 AZI2Q9H6S1 392 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 CNOT10Q9H9A5 744 aaKnown RBP16.06■□□□□ 0.16
COL9A2-202ENST00000372748 L3MBTL1Q9Y468 752 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 BZW2Q9Y6E2 419 aaKnown RBP16.06■□□□□ 0.16
COL9A2-202ENST00000372748 POTEFA5A3E0 1075 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 AKAP3O75969 853 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 SLC8A1P32418 973 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 CASP4P49662 377 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 DR1Q01658 176 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 NAA25Q14CX7 972 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 POTEGQ6S5H5 508 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 POTEEQ6S8J3 1075 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 GLYCTKQ8IVS8 523 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 ANKS4BQ8N8V4 417 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 LMBR1Q8WVP7 490 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 SEC14L1Q92503 715 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 CUL5Q93034 780 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 HES6Q96HZ4 224 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 CCDC113Q9H0I3 377 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 PSTPIP2Q9H939 334 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 AMFRQ9UKV5 643 aa16.06■□□□□ 0.16
COL9A2-202ENST00000372748 hCG_1984214I3L0E3 225 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 MEIS1O00470 390 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 BBOX1O75936 387 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 VIMP08670 466 aaKnown RBP16.05■□□□□ 0.16
COL9A2-202ENST00000372748 SEPT2Q15019 361 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 ARSHQ5FYA8 562 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 AADACL2Q6P093 401 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 ZNF713Q8N859 430 aaPredicted RBP16.05■□□□□ 0.16
COL9A2-202ENST00000372748 FBXO25Q8TCJ0 367 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 CD2APQ9Y5K6 639 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 IGKV6D-41A0A0C4DH26 115 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 MRPL12P52815 198 aaKnown RBP16.05■□□□□ 0.16
COL9A2-202ENST00000372748 PMS2P54278 862 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 SLC29A2Q14542 456 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 VPS36Q86VN1 386 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 HOOK3Q86VS8 718 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 CCDC63Q8NA47 563 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 SLC35G2Q8TBE7 412 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 ATXN2LQ8WWM7 1075 aaKnown RBP16.05■□□□□ 0.16
COL9A2-202ENST00000372748 RNF25Q96BH1 459 aaPredicted RBP16.05■□□□□ 0.16
COL9A2-202ENST00000372748 THOC1Q96FV9 657 aaKnown RBP16.05■□□□□ 0.16
COL9A2-202ENST00000372748 ADAM7Q9H2U9 754 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 GCNT4Q9P109 453 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 IGSF9BQ9UPX0 1349 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 CLIC2O15247 247 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 SKAP2O75563 359 aaPredicted RBP16.05■□□□□ 0.16
COL9A2-202ENST00000372748 GHRP10912 638 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 SHMT1P34896 483 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 CACNB3P54284 484 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 SNAP25P60880 206 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 MYO1EQ12965 1108 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 CCDC38Q502W7 563 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 SYCE1Q8N0S2 351 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 MAGEC3Q8TD91 643 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 NT5C3AQ9H0P0 336 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 IKZF4Q9H2S9 585 aa16.05■□□□□ 0.16
COL9A2-202ENST00000372748 MED24O75448 989 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 MYCNP04198 464 aaPredicted RBP16.04■□□□□ 0.16
COL9A2-202ENST00000372748 CLK2P49760 499 aaKnown RBP16.04■□□□□ 0.16
COL9A2-202ENST00000372748 EIF3BP55884 814 aaKnown RBP16.04■□□□□ 0.16
COL9A2-202ENST00000372748 PSMC6P62333 389 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 NFIAQ12857 509 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 EDRF1Q3B7T1 1238 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 DENND2CQ68D51 928 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 ZFPM1Q8IX07 1006 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 LNX1Q8TBB1 728 aaPredicted RBP16.04■□□□□ 0.16
COL9A2-202ENST00000372748 NEK9Q8TD19 979 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 TXLNGYQ9BZA5 131 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 RAB17Q9H0T7 212 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 ATP6V0A4Q9HBG4 840 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 SIX2Q9NPC8 291 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 ZDHHC18Q9NUE0 388 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 ABCF3Q9NUQ8 709 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 DAAM1Q9Y4D1 1078 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 PCDHB13Q9Y5F0 798 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 TAF1LQ8IZX4 1826 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 ZBTB5O15062 677 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 KRT13P13646 458 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 HOXD13P35453 343 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 KCNA1Q09470 495 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 PABPC4Q13310 644 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL9A2-202ENST00000372748 EPHA7Q15375 998 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 TLDC1Q6P9B6 456 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 SFR1Q86XK3 245 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 P3H4Q92791 437 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 ERP44Q9BS26 406 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 PABPC3Q9H361 631 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms