RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 FGFR4P22455 802 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 PRKCIP41743 596 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 MGAT5Q09328 741 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 ADAT2Q7Z6V5 191 aaKnown RBP17.48■□□□□ 0.39
CHD1L-203ENST00000369259 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHD1L-203ENST00000369259 B4GALNT2Q8NHY0 566 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 ASAP3Q8TDY4 903 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 ROPN1BQ9BZX4 212 aaPredicted RBP17.48■□□□□ 0.39
CHD1L-203ENST00000369259 ROPN1Q9HAT0 212 aaPredicted RBP17.48■□□□□ 0.39
CHD1L-203ENST00000369259 TXKP42681 527 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 EVX2Q03828 476 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 MKRN3Q13064 507 aaKnown RBP17.48■□□□□ 0.39
CHD1L-203ENST00000369259 SOGA3Q5TF21 947 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 DCAF12L1Q5VU92 463 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 NEK8Q86SG6 692 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 VPS36Q86VN1 386 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 AGGF1Q8N302 714 aaeCLIP17.48■□□□□ 0.39
CHD1L-203ENST00000369259 ENDOVQ8N8Q3 282 aaKnown RBP17.48■□□□□ 0.39
CHD1L-203ENST00000369259 ANKLE1Q8NAG6 615 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 LRMDAQ9H2I8 198 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 VCXQ9H320 206 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 PARP2Q9UGN5 583 aa17.48■□□□□ 0.39
CHD1L-203ENST00000369259 BCL9O00512 1426 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 TSPY2A6NKD2 308 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 HGSO14964 777 aaPredicted RBP17.47■□□□□ 0.39
CHD1L-203ENST00000369259 ATP5HO75947 161 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 UCHL3P15374 230 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 GNAQP50148 359 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 KCNH2Q12809 1159 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 ARHGAP22Q7Z5H3 698 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 DNAJC9Q8WXX5 260 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 ARHGEF2Q92974 986 aaKnown RBP17.47■□□□□ 0.39
CHD1L-203ENST00000369259 CARD9Q9H257 536 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 RARGP13631 454 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 COASYQ13057 564 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 ACVR2BQ13705 512 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 DPY19L2P1Q6NXN4 242 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 VSTM1Q6UX27 236 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 ECHDC2Q86YB7 292 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 BICD1Q96G01 975 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 NUDCD1Q96RS6 583 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.47■□□□□ 0.395e-6■■□□□ 12.1
CHD1L-203ENST00000369259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.47■□□□□ 0.39
CHD1L-203ENST00000369259 DLGAP2Q9P1A6 1054 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 CASZ1Q86V15 1759 aa17.47■□□□□ 0.39
CHD1L-203ENST00000369259 LRP5O75197 1615 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 SLC9A1P19634 815 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 RPL21P46778 160 aaKnown RBP17.46■□□□□ 0.39
CHD1L-203ENST00000369259 CUL3Q13618 768 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 CLUL1Q15846 466 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 SLC35G1Q2M3R5 365 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 PPP1R9AQ9ULJ8 1098 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 CCDC88AQ3V6T2 1871 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 AFPP02771 609 aaKnown RBP17.46■□□□□ 0.39
CHD1L-203ENST00000369259 GM2AP17900 193 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 RFC5P40937 340 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 PTGIRP43119 386 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 PTDSS1P48651 473 aaKnown RBP17.46■□□□□ 0.39
CHD1L-203ENST00000369259 GRM4Q14833 912 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 FAM26FQ5R3K3 315 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 CGB2Q6NT52 195 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 OTUD6AQ7L8S5 288 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 ANKRD42Q8N9B4 389 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 PNMA1Q8ND90 353 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 FAM13CQ8NE31 585 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 RBM46Q8TBY0 533 aaKnown RBP17.46■□□□□ 0.39
CHD1L-203ENST00000369259 KIFAP3Q92845 792 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 RUNDC3BQ96NL0 473 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 TGS1Q96RS0 853 aaKnown RBP17.46■□□□□ 0.39
CHD1L-203ENST00000369259 MAD2L2Q9UI95 211 aa17.46■□□□□ 0.39
CHD1L-203ENST00000369259 PCDH11YQ9BZA8 1340 aa17.46■□□□□ 0.38
CHD1L-203ENST00000369259 PYGLP06737 847 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 KRT13P13646 458 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 RNF220Q5VTB9 566 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 IRGCQ6NXR0 463 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 GDAP1Q8TB36 358 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 U2AF1L4Q8WU68 220 aaKnown RBP17.45■□□□□ 0.38
CHD1L-203ENST00000369259 GRAMD1AQ96CP6 724 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 TMEM237Q96Q45 408 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 MLXIPLQ9NP71 852 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 KCNK9Q9NPC2 374 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 TRPM3Q9HCF6 1732 aaPredicted RBP17.45■□□□□ 0.38
CHD1L-203ENST00000369259 TNS2Q63HR2 1409 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 BAZ2AQ9UIF9 1905 aaKnown RBP17.45■□□□□ 0.38
CHD1L-203ENST00000369259 DDX3XO00571 662 aaKnown RBP eCLIP17.45■□□□□ 0.381e-15■■■■□ 21.4
CHD1L-203ENST00000369259 PODXLO00592 558 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 CYTH3O43739 400 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 CREB1P16220 341 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 GALCP54803 685 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 RNASELQ05823 741 aaKnown RBP17.45■□□□□ 0.38
CHD1L-203ENST00000369259 ORC2Q13416 577 aaPredicted RBP17.45■□□□□ 0.38
CHD1L-203ENST00000369259 OR52E8Q6IFG1 317 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 NELFCDQ8IXH7 590 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 RBBP8NLQ8NC74 664 aaPredicted RBP17.45■□□□□ 0.38
CHD1L-203ENST00000369259 FAM136AQ96C01 138 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 IFT43Q96FT9 208 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 TRAPPC9Q96Q05 1148 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 DDX23Q9BUQ8 820 aaKnown RBP17.45■□□□□ 0.38
CHD1L-203ENST00000369259 OSGEPQ9NPF4 335 aa17.45■□□□□ 0.38
CHD1L-203ENST00000369259 RTCBQ9Y3I0 505 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms