RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SLC8A1P32418 973 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 ADCY8P40145 1251 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 SMTNP53814 917 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 ZNF543Q08ER8 600 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 SEMA3FQ13275 785 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 SEPT2Q15019 361 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 CERKLQ49MI3 558 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 ZKSCAN4Q969J2 545 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 FAM167BQ9BTA0 163 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 HOMER3Q9NSC5 361 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 GEMIN8Q9NWZ8 242 aaKnown RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 NR2E1Q9Y466 385 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 PCDHGC5Q9Y5F6 944 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 GCKP35557 465 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 SESN3P58005 492 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 ICA1Q05084 483 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 GRAPQ13588 217 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 COG2Q14746 738 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 GPATCH4Q5T3I0 446 aaKnown RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 LRCH2Q5VUJ6 765 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 CCDC137Q6PK04 289 aaKnown RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 LRIG3Q6UXM1 1119 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 CYP2W1Q8TAV3 490 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 GRAPLQ8TC17 118 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 HAS1Q92839 578 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 ARHGEF1Q92888 912 aaKnown RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 ZNF653Q96CK0 615 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 BICD1Q96G01 975 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 SGSM3Q96HU1 749 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 HEMGNQ9BXL5 484 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 SLITRK6Q9H5Y7 841 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 CNOT10Q9H9A5 744 aaKnown RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 L3MBTL1Q9Y468 752 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 TCP11X1B4DZS4 312 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 F8VZ95 297 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 DDX3XO00571 662 aaKnown RBP eCLIP7.1□□□□□ -1.276e-27■■■□□ 16.5
CSDE1-203ENST00000358528 ZBTB39O15060 712 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 SORBS3O60504 671 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 FSBPO95073 299 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 CPP00450 1065 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 SSTR3P32745 418 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 TNIP1Q15025 636 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 UAP1Q16222 522 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 ANKRD20A8PQ5CZ79 823 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 KIAA1755Q5JYT7 1200 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 FAM196AQ6ZSG2 479 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 EP400NLQ6ZTU2 488 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 ZNF365Q70YC5 407 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 TMC3Q7Z5M5 1100 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 JAMLQ86YT9 394 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 RFFLQ8WZ73 363 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 DYDC2Q96IM9 177 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 NAP1L4Q99733 375 aaKnown RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 SEMA4AQ9H3S1 761 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 HOMER2Q9NSB8 354 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 TYW1Q9NV66 732 aaKnown RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 TPX2Q9ULW0 747 aaKnown RBP7.1□□□□□ -1.27
CSDE1-203ENST00000358528 POC1B-GALNT4F8VUJ3 575 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 M0R2N6 131 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 DNM1LO00429 736 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 DLATP10515 647 aaKnown RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 KRT15P19012 456 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 SOX5P35711 763 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 EIF3BP55884 814 aaKnown RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 ATP11AP98196 1134 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 PTF1AQ7RTS3 328 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 FRMD5Q7Z6J6 570 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 FUKQ8N0W3 1084 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 PIK3R5Q8WYR1 880 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 SYN2Q92777 582 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 RUSC1Q9BVN2 902 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 PLVAPQ9BX97 442 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 AMNQ9BXJ7 453 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 RTFDC1Q9BY42 306 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 FGFR1OP2Q9NVK5 253 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 NARFQ9UHQ1 456 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 SIPA1L3O60292 1781 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 CCT8L1PA6NM43 557 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 H0Y3Z8 333 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 TRAPPC3O43617 180 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 SUN1O94901 812 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 PCK1P35558 622 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 SGO2Q562F6 1265 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 KAZNQ674X7 775 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 PPP4R3CPQ6ZMV5 832 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 SRRM1Q8IYB3 904 aaKnown RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 RPUSD2Q8IZ73 545 aaKnown RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 ARHGEF2Q92974 986 aaKnown RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 ERP44Q9BS26 406 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 PARVGQ9HBI0 331 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 TAS2R14Q9NYV8 317 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 AIPL1Q9NZN9 384 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 ALG6Q9Y672 507 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 PASKQ96RG2 1323 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 FOXO6A8MYZ6 492 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 CTNNA2P26232 953 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 GIT2Q14161 759 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 CCDC6Q16204 474 aa7.09□□□□□ -1.27
CSDE1-203ENST00000358528 ASTE1Q2TB18 679 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-203ENST00000358528 ZNF449Q6P9G9 518 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms