RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CAND2O75155 1236 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 PCDH8O95206 1070 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 PPP1R2P41236 205 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 ADKP55263 362 aaKnown RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 PRAMEP78395 509 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 CAPRIN2Q6IMN6 1127 aaKnown RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 SLC44A2Q8IWA5 706 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 NLGN1Q8N2Q7 840 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 KBTBD3Q8NAB2 608 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 SPATA33Q96N06 139 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 LZTS2Q9BRK4 669 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 EFHD1Q9BUP0 239 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 USP26Q9BXU7 913 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 FAM129AQ9BZQ8 928 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 PARVGQ9HBI0 331 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 ANAPC2Q9UJX6 822 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 ADGRA2Q96PE1 1338 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 SERPINB2P05120 415 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 PSMA3P25788 255 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 PAK2Q13177 524 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 PNOCQ13519 176 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 SYCP2LQ5T4T6 812 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 BRAPQ7Z569 592 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 ACCSQ96QU6 501 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 TYW1Q9NV66 732 aaKnown RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 PCDHB8Q9UN66 801 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 POLR1DQ9Y2S0 133 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 ARF5P84085 180 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 MYL5Q02045 173 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 LRRC41Q15345 812 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 GSTA3Q16772 222 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 PALB2Q86YC2 1186 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 TTLL6Q8N841 843 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 TTC8Q8TAM2 541 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 TUBGCP3Q96CW5 907 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 NRBF2Q96F24 287 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 INTS4Q96HW7 963 aaKnown RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 FAM227BQ96M60 508 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 ACAP3Q96P50 834 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 DDX50Q9BQ39 737 aaKnown RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 VPS11Q9H270 941 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 BHMT2Q9H2M3 363 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 SLC39A10Q9ULF5 831 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 LZTS1Q9Y250 596 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 SRPRBQ9Y5M8 271 aaKnown RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 LZTS3O60299 673 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 AFPP02771 609 aaKnown RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 TWF1Q12792 350 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 MTMR3Q13615 1198 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 RC3H1Q5TC82 1133 aaKnown RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 AHI1Q8N157 1196 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 MARCH10Q8NA82 808 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 C19orf44Q9H6X5 657 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 ARPP21Q9UBL0 812 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 PIN4Q9Y237 131 aaKnown RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 IQCMA0A1B0GVH7 501 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 TBX3O15119 743 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 SEC24DO94855 1032 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 GNA14O95837 355 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 MCF2P10911 925 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 HIRAP54198 1017 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 PCSK7Q16549 785 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 AOC3Q16853 763 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 MTHFSDQ2M296 383 aaKnown RBP6.18□□□□□ -1.42
BRCA1-203ENST00000357654 BEST2Q8NFU1 509 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 SH3TC2Q8TF17 1288 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 LPIN2Q92539 896 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 MTBPQ96DY7 904 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 VPS39Q96JC1 886 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 SPZ1Q9BXG8 430 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 OSBPL6Q9BZF3 934 aa6.18□□□□□ -1.42
BRCA1-203ENST00000357654 DHX29Q7Z478 1369 aaKnown RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 TNRQ92752 1358 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 A0A1B0GUA9 196 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 KLRF2D3W0D1 207 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 GOLGA8RI6L899 631 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 CLTAP09496 248 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ALDH1A3P47895 512 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 AARSP49588 968 aaKnown RBP eCLIP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 BTKQ06187 659 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 MED21Q13503 144 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 MTX1Q13505 466 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 TCP11Q8WWU5 503 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ARMCX3Q9UH62 379 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 SFI1A8K8P3 1242 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 MAN1A2O60476 641 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 WDR47O94967 919 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 MT-ND3P03897 115 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 RPN2P04844 631 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 HIST1H2AGP0C0S8 130 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-203ENST00000357654 TRIM27P14373 513 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 HIST1H2ADP20671 130 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 SLCO1A2P46721 670 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 SERPINB4P48594 390 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 NR1H3Q13133 447 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 DNAJC3Q13217 504 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 TAF13Q15543 124 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 ICA1LQ8NDH6 482 aa6.17□□□□□ -1.42
BRCA1-203ENST00000357654 CLIP3Q96DZ5 547 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms