RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 TAF11Q15544 211 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 BTBD8Q5XKL5 378 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 SPATA2LQ8IUW3 424 aaPredicted RBP12.09□□□□□ -0.47
FN1-204ENST00000356005 BANK1Q8NDB2 785 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 SCFD2Q8WU76 684 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 ERAP1Q9NZ08 941 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 MTMR6Q9Y217 621 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 ZFXP17010 805 aaPredicted RBP12.08□□□□□ -0.48
FN1-204ENST00000356005 STAT5BP51692 787 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 JADE1Q6IE81 842 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 TTC13Q8NBP0 860 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 HAUS6Q7Z4H7 955 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 RHOT2Q8IXI1 618 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.08□□□□□ -0.481e-323■■■□□ 15.1
FN1-204ENST00000356005 CTNNA1P35221 906 aaKnown RBP12.08□□□□□ -0.48
FN1-204ENST00000356005 ALDH1A3P47895 512 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 GMPSP49915 693 aaPredicted RBP12.08□□□□□ -0.48
FN1-204ENST00000356005 STX1BP61266 288 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 DBN1Q16643 649 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.48
FN1-204ENST00000356005 PIGOQ8TEQ8 1089 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 KIF12Q96FN5 646 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 POLR3FQ9H1D9 316 aaPredicted RBP12.08□□□□□ -0.48
FN1-204ENST00000356005 RNF14Q9UBS8 474 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 ORC6Q9Y5N6 252 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 BNIP3LO60238 219 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 PSMD6Q15008 389 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 PCSK9Q8NBP7 692 aaKnown RBP12.08□□□□□ -0.48
FN1-204ENST00000356005 NSUN7Q8NE18 718 aaKnown RBP12.08□□□□□ -0.48
FN1-204ENST00000356005 PSMD14O00487 310 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 SNAP25P60880 206 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 SEPT6Q14141 434 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 THNSL1Q8IYQ7 743 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 HOXA2O43364 376 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 ACCSLQ4AC99 568 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 PPP1R2P1Q96PQ5 205 aa12.08□□□□□ -0.48
FN1-204ENST00000356005 PXDNLA1KZ92 1463 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 LDHDQ86WU2 507 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
FN1-204ENST00000356005 KLC2Q9H0B6 622 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 SMYD2Q9NRG4 433 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 PIN4Q9Y237 131 aaKnown RBP12.07□□□□□ -0.48
FN1-204ENST00000356005 PNPLA7Q6ZV29 1317 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 SUPT20HL2P0C7V6 817 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 VPS41P49754 854 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 CYP27A1Q02318 531 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 EZH2Q15910 746 aaKnown RBP12.07□□□□□ -0.48
FN1-204ENST00000356005 FAM84BQ96KN1 310 aaPredicted RBP12.07□□□□□ -0.48
FN1-204ENST00000356005 GPC4O75487 556 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 GRIK1P39086 918 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 PREPLQ4J6C6 727 aaPredicted RBP12.07□□□□□ -0.48
FN1-204ENST00000356005 DEFB129Q9H1M3 183 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 ZNF70Q9UC06 446 aaPredicted RBP12.07□□□□□ -0.48
FN1-204ENST00000356005 BCORL1Q5H9F3 1711 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 TTC36A6NLP5 189 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 BUB1O43683 1085 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 C9orf131Q5VYM1 1079 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 TBC1D19Q8N5T2 526 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 FOPNLQ96NB1 174 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 TRIM45Q9H8W5 580 aaPredicted RBP12.07□□□□□ -0.48
FN1-204ENST00000356005 SP110Q9HB58 689 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 DIS3Q9Y2L1 958 aaKnown RBP12.07□□□□□ -0.48
FN1-204ENST00000356005 AP3B1O00203 1094 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.07□□□□□ -0.48
FN1-204ENST00000356005 LINC00116Q8NCU8 138 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 LXNQ9BS40 222 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 MICAL3Q7RTP6 2002 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 TRIM54Q9BYV2 358 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 FANCLQ9NW38 375 aa12.07□□□□□ -0.48
FN1-204ENST00000356005 SUCLA2Q9P2R7 463 aaPredicted RBP12.07□□□□□ -0.48
FN1-204ENST00000356005 RASSF7Q02833 373 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 CEP55Q53EZ4 464 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 GNASQ5JWF2 1037 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 ERO1BQ86YB8 467 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 NEDD1Q8NHV4 660 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 CENPKQ9BS16 269 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 MROH8Q9H579 483 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 FAN1Q9Y2M0 1017 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 USP42Q9H9J4 1324 aaKnown RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 SEC24BO95487 1268 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 MYLK4Q86YV6 388 aaPredicted RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 TEX2Q8IWB9 1127 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 FAM71BQ8TC56 605 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 ASIC4Q96FT7 647 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 RBM41Q96IZ5 413 aaKnown RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 NGRNQ9NPE2 291 aaKnown RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 KCND2Q9NZV8 630 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 UBE4BO95155 1302 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 NDUFAB1O14561 156 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 EIF3DO15371 548 aaKnown RBP eCLIP12.06□□□□□ -0.48
FN1-204ENST00000356005 TTC4O95801 387 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 SMARCA1P28370 1054 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 YWHABP31946 246 aaKnown RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 NVLO15381 856 aaKnown RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 ALDH7A1P49419 539 aaKnown RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 EIF2B5Q13144 721 aaKnown RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 LAMB3Q13751 1172 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 KCTD17Q8N5Z5 321 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 EFCC1Q9HA90 598 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms