RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 RPS6KA5O75582 802 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 PRPF6O94906 941 aaKnown RBP4.05□□□□□ -1.76
RNF38-203ENST00000353739 MYBL1P10243 752 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 CHRNA5P30532 468 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 HOXA13P31271 388 aaPredicted RBP4.05□□□□□ -1.76
RNF38-203ENST00000353739 CACNB3P54284 484 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 DMP1Q13316 513 aaPredicted RBP4.05□□□□□ -1.76
RNF38-203ENST00000353739 MTMR1Q13613 665 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 CTTNQ14247 550 aaKnown RBP4.05□□□□□ -1.76
RNF38-203ENST00000353739 KIF22Q14807 665 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 MUM1L1Q5H9M0 696 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 CFAP58Q5T655 872 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 ARHGEF16Q5VV41 709 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 PADI6Q6TGC4 694 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 MREGQ8N565 214 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 MCPH1Q8NEM0 835 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 FAM76AQ8TAV0 307 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 AENQ8WTP8 325 aaKnown RBP4.05□□□□□ -1.76
RNF38-203ENST00000353739 WDR18Q9BV38 432 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 NLRC4Q9NPP4 1024 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.05□□□□□ -1.76
RNF38-203ENST00000353739 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.05□□□□□ -1.76
RNF38-203ENST00000353739 APEX2Q9UBZ4 518 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 TTC7AQ9ULT0 858 aaPredicted RBP4.05□□□□□ -1.76
RNF38-203ENST00000353739 HPCAL4Q9UM19 191 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 CENPFP49454 3210 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 LOC285556D6RIA3 1793 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 PALMO75781 387 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 NOL4O94818 638 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 MAN1A1P33908 653 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 NCKAP1LP55160 1127 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 VSNL1P62760 191 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 C2orf54Q08AI8 447 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 BFSP1Q12934 665 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 KIAA0753Q2KHM9 967 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 MIS18BP1Q6P0N0 1132 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 MAATS1Q7Z4T9 603 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 ZNF677Q86XU0 584 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 CCDC125Q86Z20 511 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 SPATA4Q8NEY3 305 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 SPIRE2Q8WWL2 714 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 RFFLQ8WZ73 363 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 HPS3Q969F9 1004 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 IFT74Q96LB3 600 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 PNKPQ96T60 521 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 IRX2Q9BZI1 471 aaPredicted RBP4.05□□□□□ -1.76
RNF38-203ENST00000353739 GDF3Q9NR23 364 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 SRRM3A6NNA2 597 aaPredicted RBP4.05□□□□□ -1.76
RNF38-203ENST00000353739 CHMP2AO43633 222 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 HIP1RO75146 1068 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 AP3M2P53677 418 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 PDE4CQ08493 712 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 C11orf63Q6NUN7 778 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 PEX26Q7Z412 305 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 CREG2Q8IUH2 290 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 TMC2Q8TDI7 906 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 KCNN1Q92952 543 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 C12orf42Q96LP6 360 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.05□□□□□ -1.762e-7■■■■□ 20.1
RNF38-203ENST00000353739 STMN4Q9H169 189 aaPredicted RBP4.05□□□□□ -1.76
RNF38-203ENST00000353739 MLXIPQ9HAP2 919 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 SLC38A10Q9HBR0 1119 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 AGPAT3Q9NRZ7 376 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 DMAC2Q9NW81 257 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 VPS18Q9P253 973 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 PPP1R9AQ9ULJ8 1098 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 SYNGAP1Q96PV0 1343 aa4.05□□□□□ -1.76
RNF38-203ENST00000353739 ZMYM2Q9UBW7 1377 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 CLRN2A0PK11 232 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 ENC1O14682 589 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 NOP2P46087 812 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 BPIFB4P59827 614 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 SEL1L2Q5TEA6 688 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 B3GNT9Q6UX72 402 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 RNF207Q6ZRF8 634 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 CDAN1Q8IWY9 1227 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 SCYL3Q8IZE3 742 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 ARFGAP2Q8N6H7 521 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 XXYLT1Q8NBI6 393 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 SLC35C1Q96A29 364 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 PDE11AQ9HCR9 933 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 ZNF219Q9P2Y4 722 aaPredicted RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 FBXO40Q9UH90 709 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 SAMM50Q9Y512 469 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 ANKRD62A6NC57 917 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 FAM187AA6NFU0 413 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 ATP2A1O14983 1001 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 KIF4AO95239 1232 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 LDHAP00338 332 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 YWHABP31946 246 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 VAMP7P51809 220 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 GTF2BQ00403 316 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 CYP27A1Q02318 531 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 DHX34Q14147 1143 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 NOL9Q5SY16 702 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 ALKBH5Q6P6C2 394 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 MICALCLQ6ZW33 695 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 CD302Q8IX05 232 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 RASGEF1CQ8N431 466 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 USP38Q8NB14 1042 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms