RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 RNF25Q96BH1 459 aaPredicted RBP23.19■■□□□ 1.3
TRIM3-201ENST00000345851 TMEM260Q9NX78 707 aa23.19■■□□□ 1.3
TRIM3-201ENST00000345851 G3V3G9 751 aa23.19■■□□□ 1.3
TRIM3-201ENST00000345851 KRT16P08779 473 aa23.19■■□□□ 1.3
TRIM3-201ENST00000345851 PMS2P54278 862 aa23.19■■□□□ 1.3
TRIM3-201ENST00000345851 COASYQ13057 564 aa23.19■■□□□ 1.3
TRIM3-201ENST00000345851 SLC29A2Q14542 456 aa23.19■■□□□ 1.3
TRIM3-201ENST00000345851 DCAF8Q5TAQ9 597 aa23.19■■□□□ 1.3
TRIM3-201ENST00000345851 KLHL29Q96CT2 875 aa23.19■■□□□ 1.3
TRIM3-201ENST00000345851 SNX24Q9Y343 169 aa23.19■■□□□ 1.3
TRIM3-201ENST00000345851 LDHCP07864 332 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 NPR1P16066 1061 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 GRM4Q14833 912 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 ZCWPW2Q504Y3 356 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 IRF2BP2Q7Z5L9 587 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 TRIM59Q8IWR1 403 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 RAD54LQ92698 747 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 UIMC1Q96RL1 719 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 SLC5A4Q9NY91 659 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 STK17AQ9UEE5 414 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 TRIM33Q9UPN9 1127 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 PCDHAC2Q9Y5I4 1007 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 GALNT17Q6IS24 598 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 ARHGAP27Q6ZUM4 889 aa23.18■■□□□ 1.3
TRIM3-201ENST00000345851 EPS8L3Q8TE67 593 aaKnown RBP23.18■■□□□ 1.3
TRIM3-201ENST00000345851 TSPY3P0CV98 308 aa23.17■■□□□ 1.3
TRIM3-201ENST00000345851 TSPY8P0CW00 308 aa23.17■■□□□ 1.3
TRIM3-201ENST00000345851 CALCRLQ16602 461 aa23.17■■□□□ 1.3
TRIM3-201ENST00000345851 SPDYE1Q8NFV5 336 aaPredicted RBP23.17■■□□□ 1.3
TRIM3-201ENST00000345851 SEC14L1Q92503 715 aa23.17■■□□□ 1.3
TRIM3-201ENST00000345851 TXLNGYQ9BZA5 131 aa23.17■■□□□ 1.3
TRIM3-201ENST00000345851 RHBDL3P58872 404 aa23.17■■□□□ 1.3
TRIM3-201ENST00000345851 KCNH2Q12809 1159 aa23.17■■□□□ 1.3
TRIM3-201ENST00000345851 FAM26FQ5R3K3 315 aa23.17■■□□□ 1.3
TRIM3-201ENST00000345851 PABPC3Q9H361 631 aaKnown RBP23.17■■□□□ 1.3
TRIM3-201ENST00000345851 DAGLAQ9Y4D2 1042 aa23.17■■□□□ 1.3
TRIM3-201ENST00000345851 PPP4CP60510 307 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 RASGEF1CQ8N431 466 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 FBXO25Q8TCJ0 367 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 DYDC1Q8WWB3 177 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 GJA10Q969M2 543 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 ARHGEF10LQ9HCE6 1279 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 PNMA3Q9UL41 463 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 GPR75-ASB3A0A0A6YYF3 556 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 CCDC169A6NNP5 214 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 EVI5O60447 810 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 DR1Q01658 176 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 AP1ARQ63HQ0 302 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 NT5DC3Q86UY8 548 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 ZNF444Q8N0Y2 327 aaPredicted RBP23.16■■□□□ 1.3
TRIM3-201ENST00000345851 NSRP1Q9H0G5 558 aaKnown RBP23.16■■□□□ 1.3
TRIM3-201ENST00000345851 RAB17Q9H0T7 212 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 MLXIPLQ9NP71 852 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 FGFR1OP2Q9NVK5 253 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 KIAA1551Q9HCM1 1747 aa23.16■■□□□ 1.3
TRIM3-201ENST00000345851 BTNL10A8MVZ5 291 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 SLC37A4O43826 429 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 SNX3O60493 162 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 GNAQP50148 359 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 POU5F1Q01860 360 aaKnown RBP23.15■■□□□ 1.3
TRIM3-201ENST00000345851 ZNF211Q13398 564 aaPredicted RBP23.15■■□□□ 1.3
TRIM3-201ENST00000345851 THEMIS2Q5TEJ8 643 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 SEMA4AQ9H3S1 761 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 ERVK-5Q9HDB9 667 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 DBR1Q9UK59 544 aaKnown RBP23.15■■□□□ 1.3
TRIM3-201ENST00000345851 DAAM1Q9Y4D1 1078 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 ALADP13716 330 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 CCND1P24385 295 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 PGM2Q96G03 612 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 OSGEPQ9NPF4 335 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 KLRF2D3W0D1 207 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 TDP2O95551 362 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 ECM1Q16610 540 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 ANKRD20A2Q5SQ80 823 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 ANKRD20A1Q5TYW2 823 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 ANKRD20A3Q5VUR7 823 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 MASTLQ96GX5 879 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 ZDHHC18Q9NUE0 388 aa23.15■■□□□ 1.3
TRIM3-201ENST00000345851 SUCLA2Q9P2R7 463 aaPredicted RBP23.15■■□□□ 1.3
TRIM3-201ENST00000345851 H2AFZP0C0S5 128 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 MYBL1P10243 752 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 FGFR4P22455 802 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 TRIM68Q6AZZ1 485 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 H2AFVQ71UI9 128 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 CLEC10AQ8IUN9 316 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 U2AF1L4Q8WU68 220 aaKnown RBP23.14■■□□□ 1.29
TRIM3-201ENST00000345851 SH3GL3Q99963 347 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 ZHX3Q9H4I2 956 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 C6orf50Q9HD87 102 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 MAST2Q6P0Q8 1798 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 AP1G2O75843 785 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 NUDT17P0C025 328 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 UCHL3P15374 230 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 RASA1P20936 1047 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 CACNB3P54284 484 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 ADAM9Q13443 819 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 KRT79Q5XKE5 535 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 OTUD6AQ7L8S5 288 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 RBM46Q8TBY0 533 aaKnown RBP23.14■■□□□ 1.29
TRIM3-201ENST00000345851 ERP44Q9BS26 406 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms