RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 GRIK4Q16099 956 aa16.06■□□□□ 0.16
NIPAL3-202ENST00000339255 LHX8Q68G74 356 aa16.06■□□□□ 0.16
NIPAL3-202ENST00000339255 CCSAPQ6IQ19 270 aaPredicted RBP16.06■□□□□ 0.16
NIPAL3-202ENST00000339255 ADSSL1Q8N142 457 aa16.06■□□□□ 0.16
NIPAL3-202ENST00000339255 SPIRE2Q8WWL2 714 aa16.06■□□□□ 0.16
NIPAL3-202ENST00000339255 DHTKD1Q96HY7 919 aaPredicted RBP16.06■□□□□ 0.16
NIPAL3-202ENST00000339255 IFT74Q96LB3 600 aa16.06■□□□□ 0.16
NIPAL3-202ENST00000339255 SLC39A2Q9NP94 309 aa16.06■□□□□ 0.16
NIPAL3-202ENST00000339255 GDAQ9Y2T3 454 aa16.06■□□□□ 0.16
NIPAL3-202ENST00000339255 PCDHA2Q9Y5H9 948 aa16.06■□□□□ 0.16
NIPAL3-202ENST00000339255 MOXD2PA6NHM9 499 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 SMIM10L2AP0DMW4 78 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 SMIM10L2BP0DMW5 78 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 GNAT1P11488 350 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 PRCPP42785 496 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 MXD4Q14582 209 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 IER5Q5VY09 327 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 MAEAQ7L5Y9 396 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 GAS2L3Q86XJ1 694 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 MYOCDQ8IZQ8 938 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 POLR3FQ9H1D9 316 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 ST6GALNAC4Q9H4F1 302 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 SIP14410 1827 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 PPP1R3GB7ZBB8 358 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 ASGR1P07306 291 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 TMOD1P28289 359 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 ARL2P36404 184 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 IRX5P78411 483 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 PAK1Q13153 545 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 LRRC41Q15345 812 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 KCNA10Q16322 511 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 FOXR2Q6PJQ5 311 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 CXCL17Q6UXB2 119 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 SMYD4Q8IYR2 804 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 C7orf31Q8N865 590 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 LMBR1Q8WVP7 490 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 PSPC1Q8WXF1 523 aaKnown RBP16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 NTPCRQ9BSD7 190 aaKnown RBP16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 UNC93B1Q9H1C4 597 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 GPRC5CQ9NQ84 441 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 PCDHB13Q9Y5F0 798 aa16.05■□□□□ 0.16
NIPAL3-202ENST00000339255 BICDL2A1A5D9 508 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 MBLAC1A4D2B0 266 aaPredicted RBP16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 GOLGA6L3A6NEY3 463 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 SFI1A8K8P3 1242 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 IKBKBO14920 756 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 KLRC1P26715 233 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 HOXC8P31273 242 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 MYL5Q02045 173 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 BMT2Q1RMZ1 405 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 EPM2AIP1Q7L775 607 aaPredicted RBP16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 TRAPPC12Q8WVT3 735 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 KCNN1Q92952 543 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 HPS3Q969F9 1004 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 HVCN1Q96D96 273 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 RWDD2AQ9UIY3 292 aa16.04■□□□□ 0.16
NIPAL3-202ENST00000339255 PHLPP2Q6ZVD8 1323 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 BECN2A8MW95 431 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 KBTBD13C9JR72 458 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 ASAP2O43150 1006 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 GCNT3O95395 438 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 CCL5P13501 91 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 CD44P16070 742 aaKnown RBP16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 NAMPTP43490 491 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 NPTX2P47972 431 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 PEX3P56589 373 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 IGBP1P78318 339 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 EFCAB12Q6NXP0 572 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 NFRKBQ6P4R8 1299 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 MTHFD1LQ6UB35 978 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 ZNF720Q7Z2F6 126 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 SESTD1Q86VW0 696 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 METTL13Q8N6R0 699 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 TMEM143Q96AN5 459 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 ARMC5Q96C12 935 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 FIZ1Q96SL8 496 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 RNF208Q9H0X6 261 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 SUGCTQ9HAC7 445 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 CBX8Q9HC52 389 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 KMT5AQ9NQR1 393 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 TBC1D7Q9P0N9 293 aa16.03■□□□□ 0.16
NIPAL3-202ENST00000339255 FSD2A1L4K1 749 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 SMTNL1A8MU46 457 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 K7ENM7 598 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 RPLP2P05387 115 aaKnown RBP16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 ACLYP53396 1101 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 NCKAP1LP55160 1127 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 CHMP4BP1P59074 171 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 LRRC63Q05C16 580 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 TFDP1Q14186 410 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 MARCH8Q5T0T0 291 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 KLHL10Q6JEL2 608 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 ZNF710Q8N1W2 664 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 LINC01465Q8N7H1 131 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 ENOX1Q8TC92 643 aaKnown RBP16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 SCFD1Q8WVM8 642 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 MAP7D2Q96T17 732 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 SEZ6LQ9BYH1 1024 aa16.02■□□□□ 0.16
NIPAL3-202ENST00000339255 SETD4Q9NVD3 440 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms