RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CCNA1P78396 465 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 TRAF1Q13077 416 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 MAP2K5Q13163 448 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 CCL14Q16627 93 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 CCDC96Q2M329 555 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 Q4G0T1 1027 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 ALS2CLQ60I27 953 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 TMEM179Q6ZVK1 233 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 NECAB2Q7Z6G3 386 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 FMNL3Q8IVF7 1028 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 MREGQ8N565 214 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 CAGE1Q8TC20 777 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 OSBPL9Q96SU4 736 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 APBA2Q99767 749 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 SH3GL2Q99962 352 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 PRO3102Q9H379 93 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 DEF6Q9H4E7 631 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 VPS18Q9P253 973 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 OGDHLQ9ULD0 1010 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 TRAF3IP3Q9Y228 551 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 CAPN6Q9Y6Q1 641 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 UBE4BO95155 1302 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 ERICH4A6NGS2 130 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 POTEMA6NI47 508 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 SLC15A5A6NIM6 579 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 SRRM3A6NNA2 597 aaPredicted RBP11.81□□□□□ -0.52
RTN3-201ENST00000338850 GOLGA8KD6RF30 607 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 PDE2AO00408 941 aaPredicted RBP11.81□□□□□ -0.52
RTN3-201ENST00000338850 SLC16A3O15427 465 aaKnown RBP11.81□□□□□ -0.52
RTN3-201ENST00000338850 EVI5O60447 810 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 SYF2O95926 243 aaKnown RBP11.81□□□□□ -0.52
RTN3-201ENST00000338850 CIITAP33076 1130 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 PRKCIP41743 596 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 PAFAH1B1P43034 410 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 KLK7P49862 253 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 CACNB2Q08289 660 aaPredicted RBP11.81□□□□□ -0.52
RTN3-201ENST00000338850 KCNMA1Q12791 1236 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 SLC18A3Q16572 532 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 KIAA1755Q5JYT7 1200 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 EMC10Q5UCC4 262 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 SFMBT2Q5VUG0 894 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 FRMD5Q7Z6J6 570 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 CLEC10AQ8IUN9 316 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 SIAH1Q8IUQ4 282 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 ADGRF4Q8IZF3 695 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 SPATA4Q8NEY3 305 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 ERMNQ8TAM6 284 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 AFAP1L1Q8TED9 768 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 PLIN2Q99541 437 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 CRACR2AQ9BSW2 395 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 SELENOOQ9BVL4 669 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 KCTD10Q9H3F6 313 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 PANK4Q9NVE7 773 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 TMEM260Q9NX78 707 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 HDAC6Q9UBN7 1215 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 INTUQ9ULD6 942 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 PCDHA12Q9UN75 941 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 FAN1Q9Y2M0 1017 aa11.81□□□□□ -0.52
RTN3-201ENST00000338850 A0A0U1RQG5 324 aaPredicted RBP11.8□□□□□ -0.52
RTN3-201ENST00000338850 ENC1O14682 589 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 OPA1O60313 960 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 RNF40O75150 1001 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 NOL4O94818 638 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 LMAN1P49257 510 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 PPFIA1Q13136 1202 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 COG2Q14746 738 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 NAB2Q15742 525 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 IFI16Q16666 785 aaKnown RBP11.8□□□□□ -0.52
RTN3-201ENST00000338850 CFAP221Q4G0U5 840 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 WDR78Q5VTH9 848 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 CACNA2D4Q7Z3S7 1137 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 GMCL1P1Q8NEA9 526 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 FAM20AQ96MK3 541 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 FAM107BQ9H098 131 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 GANQ9H2C0 597 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 METTL14Q9HCE5 456 aaKnown RBP11.8□□□□□ -0.52
RTN3-201ENST00000338850 JADE2Q9NQC1 790 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 STIM2Q9P246 746 aa11.8□□□□□ -0.52
RTN3-201ENST00000338850 ATXN2Q99700 1313 aaKnown RBP11.8□□□□□ -0.52
RTN3-201ENST00000338850 A0A0A6YYK5 440 aaPredicted RBP11.79□□□□□ -0.52
RTN3-201ENST00000338850 MACROD2A1Z1Q3 448 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 PDXKO00764 312 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 EPHB6O15197 1021 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 PPP1R11O60927 126 aaPredicted RBP11.79□□□□□ -0.52
RTN3-201ENST00000338850 PPFIA4O75335 1185 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 CYP3A4P08684 503 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 HOXC6P09630 235 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 PLA2G4BP0C869 781 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 CYP11B2P19099 503 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 CCND3P30281 292 aaPredicted RBP11.79□□□□□ -0.52
RTN3-201ENST00000338850 ICA1Q05084 483 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 RAD51AP2Q09MP3 1159 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 GRB14Q14449 540 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 CCDC40Q4G0X9 1142 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 FAM83BQ5T0W9 1011 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 KLHDC7AQ5VTJ3 777 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 LHX8Q68G74 356 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 BTNL9Q6UXG8 535 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 RRAGAQ7L523 313 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 EPM2AIP1Q7L775 607 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms