RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 TRAF3IP3Q9Y228 551 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 SSC5DA1L4H1 1573 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 FRMPD4Q14CM0 1322 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 RPTORQ8N122 1335 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 EIF3CLB5ME19 914 aaKnown RBP13.77□□□□□ -0.21
LIMK1-201ENST00000336180 PDXKO00764 312 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 PLA2G6O60733 806 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 UCHL3P15374 230 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 PTK2Q05397 1052 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 B3GNT9Q6UX72 402 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 HS2ST1Q7LGA3 356 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 APOBEC3FQ8IUX4 373 aaKnown RBP13.77□□□□□ -0.21
LIMK1-201ENST00000336180 RETREG2Q8NC44 543 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 KAT5Q92993 513 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 CEP170P1Q96L14 293 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 EIF3CQ99613 913 aaKnown RBP13.77□□□□□ -0.21
LIMK1-201ENST00000336180 GBP3Q9H0R5 595 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 GANQ9H2C0 597 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 SYNPO2Q9UMS6 1093 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 SNCAIPQ9Y6H5 919 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 MARK3P27448 753 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 VAV2P52735 878 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 ASIC2Q16515 512 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 C9orf131Q5VYM1 1079 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 CCDC60Q8IWA6 550 aaPredicted RBP13.76□□□□□ -0.21
LIMK1-201ENST00000336180 SULF1Q8IWU6 871 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 PPP1R13LQ8WUF5 828 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 RIT2Q99578 217 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 CYP39A1Q9NYL5 469 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 ATAD5Q96QE3 1844 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 ANKRD63C9JTQ0 380 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 HARSP12081 509 aaKnown RBP13.76□□□□□ -0.21
LIMK1-201ENST00000336180 SEZ6Q53EL9 994 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 IQCEQ6IPM2 695 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 ZNF571Q7Z3V5 609 aaPredicted RBP13.76□□□□□ -0.21
LIMK1-201ENST00000336180 SRGAP1Q7Z6B7 1085 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 GOLGA1Q92805 767 aa13.76□□□□□ -0.21
LIMK1-201ENST00000336180 EFCAB8A8MWE9 144 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 KLRC1P26715 233 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 EDRF1Q3B7T1 1238 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 SLC9C1Q4G0N8 1177 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 CATSPERGQ6ZRH7 1159 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 GPC2Q8N158 579 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 REPS2Q8NFH8 660 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 TMEM143Q96AN5 459 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 DCPSQ96C86 337 aaKnown RBP13.75□□□□□ -0.21
LIMK1-201ENST00000336180 CEP72Q9P209 647 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 KIAA0753Q2KHM9 967 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 KLHDC7AQ5VTJ3 777 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 HAUS6Q7Z4H7 955 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.75□□□□□ -0.21
LIMK1-201ENST00000336180 AFG3L2Q9Y4W6 797 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 MYH10P35580 1976 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 A0A1W2PQJ5 194 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 ABCB4P21439 1286 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 VSIG10LQ86VR7 867 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 CBWD2Q8IUF1 395 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 TEX13BQ9BXU2 312 aa13.75□□□□□ -0.21
LIMK1-201ENST00000336180 POLR3GO15318 223 aaPredicted RBP13.74□□□□□ -0.21
LIMK1-201ENST00000336180 RPL13P26373 211 aaKnown RBP13.74□□□□□ -0.21
LIMK1-201ENST00000336180 CCND2P30279 289 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 SSTR3P32745 418 aaPredicted RBP13.74□□□□□ -0.21
LIMK1-201ENST00000336180 NOP2P46087 812 aaKnown RBP13.74□□□□□ -0.21
LIMK1-201ENST00000336180 TAF3Q5VWG9 929 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 ZNF746Q6NUN9 644 aaPredicted RBP13.74□□□□□ -0.21
LIMK1-201ENST00000336180 TRIM50Q86XT4 487 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 PLEKHO2Q8TD55 490 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 PPP1R16BQ96T49 567 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 OLFML3Q9NRN5 406 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 FRMD4BQ9Y2L6 1034 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 SAR1BQ9Y6B6 198 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 DOCK5Q9H7D0 1870 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 CTAGE15A4D2H0 777 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 SASH3O75995 380 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 GNA14O95837 355 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 CTAGE8P0CG41 777 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 H2AFXP16104 143 aaPredicted RBP13.74□□□□□ -0.21
LIMK1-201ENST00000336180 GAP43P17677 238 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 PSMC2P35998 433 aaKnown RBP13.74□□□□□ -0.21
LIMK1-201ENST00000336180 AMPD2Q01433 879 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 CTAGE6Q86UF2 777 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 CTAGE4Q8IX94 777 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 ANKZF1Q9H8Y5 726 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 ZNF112Q9UJU3 913 aa13.74□□□□□ -0.21
LIMK1-201ENST00000336180 WDR64B1ANS9 1081 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 GYS2P54840 703 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 SLC7A5Q01650 507 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 MAP2K1Q02750 393 aaPredicted RBP13.73□□□□□ -0.21
LIMK1-201ENST00000336180 GBP6Q6ZN66 633 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 RSRC2Q7L4I2 434 aaKnown RBP13.73□□□□□ -0.21
LIMK1-201ENST00000336180 PALB2Q86YC2 1186 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 CCDC170Q8IYT3 715 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 ACAD9Q9H845 621 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 ZCCHC17Q9NP64 241 aaKnown RBP13.73□□□□□ -0.21
LIMK1-201ENST00000336180 SIX2Q9NPC8 291 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 CSADQ9Y600 493 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 EMSYQ7Z589 1322 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 DLATP10515 647 aaKnown RBP13.73□□□□□ -0.21
LIMK1-201ENST00000336180 VSNL1P62760 191 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms