RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 DYNC2H1Q8NCM8 4307 aaKnown RBP1.92□□□□□ -2.1
LINC00643-201ENST00000334389 THADAQ6YHU6 1953 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ST8SIA5O15466 376 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 HOXB4P17483 251 aaPredicted RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 MUTP22033 750 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ADORA2AP29274 412 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ALDH7A1P49419 539 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 E2F1Q01094 437 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ORC1Q13415 861 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CNGB1Q14028 1251 aaPredicted RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 KCNA10Q16322 511 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 PROSER3Q2NL68 480 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 MAP7D1Q3KQU3 841 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 JAKMIP3Q5VZ66 844 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 PMS2CLQ68D20 193 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 TBC1D9Q6ZT07 1266 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 NEK8Q86SG6 692 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 RAB11FIP4Q86YS3 637 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 LRRC75A-AS1Q8N1F1 130 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CCDC24Q8N4L8 307 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 FIBCD1Q8N539 461 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 DCBLD1Q8N8Z6 715 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 FAM181AQ8N9Y4 354 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 KREMEN2Q8NCW0 462 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 TPCN2Q8NHX9 752 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CYP2W1Q8TAV3 490 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 SEC14L1Q92503 715 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ACDQ96AP0 544 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 MMP19Q99542 508 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 GPHNQ9NQX3 736 aaPredicted RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 SNRKQ9NRH2 765 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 DMGDHQ9UI17 866 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 PCDHA2Q9Y5H9 948 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 MASP2O00187 686 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 SYNCRIPO60506 623 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 PROCP04070 461 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 EDN1P05305 212 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 SERPINF2P08697 491 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 RBP3P10745 1247 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ACP1P24666 158 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 TNFRSF4P43489 277 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 RXRGP48443 463 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 MRPS21P82921 87 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 SIM2Q14190 667 aaPredicted RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 MVPQ14764 893 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 FSCN1Q16658 493 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CRB2Q5IJ48 1285 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 PRSS36Q5K4E3 855 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 TTC6Q86TZ1 520 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 LRRC43Q8N309 656 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ZFRQ96KR1 1074 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 FOXC2Q99958 501 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CD248Q9HCU0 757 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CNNM1Q9NRU3 951 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 KANSL3Q9P2N6 904 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 TRMT112Q9UI30 125 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ZMYND8Q9ULU4 1186 aaPredicted RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 APOBEC2Q9Y235 224 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 STARD13Q9Y3M8 1113 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CYP46A1Q9Y6A2 500 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 STK24Q9Y6E0 443 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 NUP205Q92621 2012 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ZNF462Q96JM2 2506 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 MN1Q10571 1320 aaPredicted RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 IGSF9BQ9UPX0 1349 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CHADO15335 359 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 PRPF3O43395 683 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 RNGTTO60942 597 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 PPFIA4O75335 1185 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 TACC1O75410 805 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ECM2O94769 699 aaPredicted RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ARHGEF15O94989 841 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 IGKV5-2P06315 115 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 SLFN14P0C7P3 912 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CKBP12277 381 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 IL15P40933 162 aaPredicted RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ADCYAP1R1P41586 468 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 KCNC1P48547 511 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CFHR1Q03591 330 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 UBAP2LQ14157 1087 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 TBC1D25Q3MII6 688 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CAVIN4Q5BKX8 364 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 XKR4Q5GH76 650 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 TREML2Q5T2D2 321 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 DEF8Q6ZN54 512 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 TTLL7Q6ZT98 887 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 SYT13Q7L8C5 426 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 SH3RF1Q7Z6J0 888 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 MILR1Q7Z6M3 343 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 FAM26EQ8N5C1 309 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 SCFD2Q8WU76 684 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 PHF10Q8WUB8 498 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CNOT6LQ96LI5 555 aaKnown RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ARHGEF10LQ9HCE6 1279 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 RNF19AQ9NV58 838 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 CLDND1Q9NY35 253 aa1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ORC3Q9UBD5 711 aaPredicted RBP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.91□□□□□ -2.1
LINC00643-201ENST00000334389 ANAPC1Q9H1A4 1944 aa1.9□□□□□ -2.1
LINC00643-201ENST00000334389 DOPEY1Q5JWR5 2465 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms